Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-1175P-201ENST00000365200 107 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 SNORA67.2-201ENST00000384300 149 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 MIR586-201ENST00000385035 97 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 RNU2-48P-201ENST00000410694 191 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 Z98949.2-201ENST00000440996 144 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 RPL23AP3-201ENST00000453844 468 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 AC135776.4-201ENST00000624300 1904 ntBASIC2.74□□□□□ -1.97
NR2E3Q9Y5X4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 SNORD31B-201ENST00000364977 69 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 Y_RNA.415-201ENST00000384012 112 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 RNA5SP210-201ENST00000391034 120 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 AC018868.1-201ENST00000491307 315 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 SEPT14P8-201ENST00000508026 178 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 ATP5EP1-201ENST00000510257 156 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 RNU1-117P-201ENST00000517041 158 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 AC009779.6-201ENST00000603972 165 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 AC022441.3-201ENST00000605737 136 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 AC011373.1-201ENST00000607270 237 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 U2.14-201ENST00000615943 113 ntBASIC2.73□□□□□ -1.97
NR2E3Q9Y5X4 ZNF271P-202ENST00000465539 1970 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 MIR410-201ENST00000362222 80 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 MIR1283-1-201ENST00000408494 87 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 RAB28P5-201ENST00000427490 651 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AC009238.1-201ENST00000442165 424 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AC009237.6-201ENST00000446969 424 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AL139109.1-201ENST00000455491 297 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 RNU6-625P-201ENST00000459412 107 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 AL590240.4-201ENST00000616908 390 ntBASIC2.72□□□□□ -1.97
NR2E3Q9Y5X4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.71□□□□□ -1.97
NR2E3Q9Y5X4 U3.8-201ENST00000363675 217 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-326P-201ENST00000365480 107 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 SNORA64-201ENST00000384674 134 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 MIR548I3-201ENST00000408378 149 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 MIR548I1-201ENST00000408810 149 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 HMGN2P18-201ENST00000450680 270 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC016925.1-201ENST00000458303 298 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU7-26P-201ENST00000458980 63 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC114982.1-201ENST00000469402 321 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-138P-201ENST00000515952 107 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU7-110P-201ENST00000516891 62 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNA5SP490-201ENST00000517141 136 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-667P-201ENST00000517186 102 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC130289.1-201ENST00000577321 73 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC005176.2-201ENST00000596933 147 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 AC092881.1-201ENST00000638218 2733 ntBASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-545P-201ENST00000362681 104 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.76-201ENST00000362931 109 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-454P-201ENST00000364292 107 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-1305P-201ENST00000364353 104 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 SNORD87-201ENST00000364849 89 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-438P-201ENST00000365561 103 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.498-201ENST00000384460 102 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 SNORA26.9-201ENST00000391322 122 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AL139156.1-201ENST00000412785 841 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC009310.1-201ENST00000414414 451 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC074290.1-201ENST00000448883 135 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 HMGN2P9-201ENST00000476875 229 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RPL36AP21-201ENST00000490372 323 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 MIR4753-201ENST00000585119 83 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC008749.1-201ENST00000597650 306 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC004467.1-201ENST00000615678 330 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 AC091932.3-201ENST00000624223 323 ntBASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NR2E3Q9Y5X4 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 RNU6-200P-201ENST00000364743 107 ntBASIC2.69□□□□□ -1.98
NR2E3Q9Y5X4 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms