Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC005002.2-201ENST00000438228 269 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 HMGN2P9-201ENST00000476875 229 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 RNY3P15-201ENST00000516297 97 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 RNU6-966P-201ENST00000516479 104 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 MIR4300-201ENST00000581016 96 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 LINC02555-201ENST00000563933 1951 ntBASIC2.14□□□□□ -2.07
SNX9Q9Y5X1 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 snoU2_19.2-201ENST00000363024 80 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 RNU6-1199P-201ENST00000411249 104 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 RPL21P38-201ENST00000418090 167 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 UQCRBP2-201ENST00000447827 297 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 NDUFB4P10-201ENST00000452541 359 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AC016925.1-201ENST00000458303 298 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AC093259.1-201ENST00000509755 300 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.713-201ENST00000517013 96 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 MIR5089-201ENST00000580047 84 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 MIR8062-201ENST00000621515 85 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 AC130454.1-201ENST00000622948 401 ntBASIC2.13□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.149-201ENST00000363558 117 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 U3.8-201ENST00000363675 217 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNU6-454P-201ENST00000364292 107 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNU6-472P-201ENST00000384299 107 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.498-201ENST00000384460 102 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 MIR215-201ENST00000384858 110 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 HMGN2P3-201ENST00000433603 273 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 HMGN2P5-201ENST00000436882 273 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNU6-625P-201ENST00000459412 107 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNU1-117P-201ENST00000517041 158 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 RNU6-667P-201ENST00000517186 102 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SNX9Q9Y5X1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.101-201ENST00000363154 102 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.376-201ENST00000365638 108 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.570-201ENST00000384750 101 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 MT-TW-201ENST00000387382 68 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 MIR300-201ENST00000401138 83 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 MIR1289-2-201ENST00000408360 111 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 MTCO1P44-201ENST00000441935 243 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 RNU6-1143P-201ENST00000516125 104 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 SNORA40.15-201ENST00000516884 107 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 AP003733.2-201ENST00000529409 171 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 AL031274.2-201ENST00000599419 203 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 7SK.10-201ENST00000621414 298 ntBASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.11□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.193-201ENST00000363979 102 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU6-743P-201ENST00000364151 106 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 Y_RNA.230-201ENST00000364348 109 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU6-1264P-201ENST00000383891 107 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AL512604.1-201ENST00000404812 257 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 MIR1185-2-201ENST00000408687 86 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU6-496P-201ENST00000516145 99 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC022441.3-201ENST00000605737 136 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 AC004467.1-201ENST00000615678 330 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 MIR376A1-201ENST00000616574 68 ntBASIC2.1□□□□□ -2.07
SNX9Q9Y5X1 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 290.4 ms