Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 MIR548A1-201ENST00000385041 97 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 MIR300-201ENST00000401138 83 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 RNU2-55P-201ENST00000411146 174 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AC025750.2-201ENST00000442609 450 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 RNU6-781P-201ENST00000516377 101 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AC015720.1-201ENST00000565251 277 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AL021707.8-201ENST00000609428 183 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 uc_338.14-201ENST00000613162 166 ntBASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX11Q9Y5W9 AL159152.1-201ENST00000635019 2587 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.309-201ENST00000365046 111 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 SNORD58C-201ENST00000365223 64 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 RNU6-975P-201ENST00000384296 105 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 MIR1294-201ENST00000408503 142 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 RNU6-221P-201ENST00000459541 99 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 AC021205.2-201ENST00000480069 347 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 AC083906.5-201ENST00000503722 328 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 RNU2-60P-201ENST00000517290 128 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 RPL23AP91-201ENST00000569211 455 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 AL137790.1-201ENST00000634283 177 ntBASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX11Q9Y5W9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 RNU6-418P-201ENST00000384035 107 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 RNU2-37P-201ENST00000410695 177 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AL031183.1-201ENST00000457667 207 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 ATP5EP1-201ENST00000510257 156 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AL033523.1-201ENST00000605153 153 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AC093732.2-201ENST00000607950 274 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 AC013412.1-201ENST00000610687 192 ntBASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX11Q9Y5W9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 MIR450A1-201ENST00000362262 91 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.634-201ENST00000364811 113 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 MIR29B2-201ENST00000385055 81 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 AC010531.2-201ENST00000465012 153 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 RPS26P45-201ENST00000471748 340 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 RPS27P22-201ENST00000478056 241 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 MIR7106-201ENST00000612419 65 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 uc_338.4-201ENST00000616635 176 ntBASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX11Q9Y5W9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 RNU6-944P-201ENST00000364023 107 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 RNU6-234P-201ENST00000365229 104 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 SNORD6-201ENST00000365444 73 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AL603914.1-201ENST00000401964 204 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.651-201ENST00000459380 103 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AC109329.2-201ENST00000519658 482 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 MIR5582-201ENST00000579697 68 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
SNX11Q9Y5W9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 RNU6-647P-201ENST00000364243 107 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 SNORA72-201ENST00000384339 132 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.617-201ENST00000410920 90 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 AC023449.1-201ENST00000454464 154 ntBASIC3.16□□□□□ -1.9
SNX11Q9Y5W9 Y_RNA.649-201ENST00000459077 103 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms