Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC131280.1-202ENST00000624067 4211 ntBASIC2.97□□□□□ -1.93
CTDP1Q9Y5B0 RNU6-454P-201ENST00000364292 107 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-220P-201ENST00000390919 107 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-918P-201ENST00000391219 106 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNA5SP504-201ENST00000410676 117 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 BTF3P11-201ENST00000426582 477 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-436P-201ENST00000516171 114 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-255P-201ENST00000516957 105 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-1212P-201ENST00000517023 104 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 SCARNA3-201ENST00000517097 143 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 AC091544.4-201ENST00000555268 342 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 MIR4658-201ENST00000584344 65 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RPL30P11-203ENST00000598995 310 ntBASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
CTDP1Q9Y5B0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-1272P-201ENST00000362776 107 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 MIR181B1-201ENST00000385240 110 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 RN7SKP284-201ENST00000411002 343 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 TOMM22P2-201ENST00000430735 237 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 AL392103.1-201ENST00000447000 198 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 AC004486.1-201ENST00000546846 233 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 AL365265.1-201ENST00000621045 234 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 AC090517.3-201ENST00000625170 141 ntBASIC2.95□□□□□ -1.94
CTDP1Q9Y5B0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 SNORA40.19-201ENST00000390846 128 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RN7SKP51-201ENST00000410781 304 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RPS27AP9-201ENST00000477681 438 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RNA5SP112-201ENST00000515937 99 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RNA5SP320-201ENST00000516263 124 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-406P-201ENST00000516470 107 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 AC009127.3-201ENST00000570531 403 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MIR3670-2-201ENST00000582974 65 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MIR3133-201ENST00000583157 78 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MIR3670-1-201ENST00000584160 65 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MIR3670-3-201ENST00000584855 65 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 AL049779.4-201ENST00000604500 156 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 RPL17P51-201ENST00000605218 238 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 MIR3670-4-201ENST00000612260 65 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 AL590808.1-201ENST00000618696 141 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 U6.106-201ENST00000636360 105 ntBASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CTDP1Q9Y5B0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 MIR29B2-201ENST00000385055 81 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 RNA5SP210-201ENST00000391034 120 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 AC140059.1-201ENST00000489238 361 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 SNORD53-201ENST00000579969 78 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 MIR4308-201ENST00000580634 81 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 AL008718.3-201ENST00000610217 321 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 AC245884.12-201ENST00000615364 59 ntBASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CTDP1Q9Y5B0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 U3.8-201ENST00000363675 217 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 AL031003.1-201ENST00000404229 172 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 U6atac.2-201ENST00000408644 118 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 Y_RNA.703-201ENST00000516846 111 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 MIR5692C2-201ENST00000577959 77 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 MIR3945-201ENST00000581853 98 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 ZNF271P-202ENST00000465539 1970 ntBASIC2.92□□□□□ -1.94
CTDP1Q9Y5B0 SNORD115-30-201ENST00000364117 82 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 SNORD32B-201ENST00000364460 84 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 Y_RNA.240-201ENST00000364469 95 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 Y_RNA.435-201ENST00000384095 112 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 SNORA67.2-201ENST00000384300 149 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 HMGB3P3-201ENST00000510526 400 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 MIR3199-1-201ENST00000582434 88 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 AC069294.1-201ENST00000608397 350 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 AC064859.1-201ENST00000624741 174 ntBASIC2.91□□□□□ -1.94
CTDP1Q9Y5B0 AC008873.1-201ENST00000625051 138 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms