Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 RNU2-34P-201ENST00000516534 121 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 RNU6-1137P-201ENST00000517073 99 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AP002001.1-203ENST00000534002 267 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AC124312.5-201ENST00000604451 268 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.91□□□□□ -2.1
YIPF1Q9Y548 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNA5SP190-201ENST00000365222 118 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.389-201ENST00000383924 113 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 SDAD1P3-201ENST00000427380 333 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU6-221P-201ENST00000459541 99 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC093852.1-201ENST00000503587 266 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU6-1041P-201ENST00000516254 102 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU6-856P-201ENST00000516959 98 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC025647.1-201ENST00000517879 253 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC055872.1-201ENST00000570978 278 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.9□□□□□ -2.11
YIPF1Q9Y548 AC006001.4-201ENST00000622243 395 ntBASIC1.9□□□□□ -2.11
YIPF1Q9Y548 RNU6-626P-201ENST00000363354 107 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.158-201ENST00000363651 101 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.326-201ENST00000365176 113 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 RNU6-1264P-201ENST00000383891 107 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.527-201ENST00000384573 102 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 SNORA17.3-201ENST00000391159 129 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 AC016909.1-201ENST00000415916 166 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 MIR3683-201ENST00000580847 82 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 MIR4680-201ENST00000580906 66 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 AL390123.1-201ENST00000603216 237 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 AL021879.1-201ENST00000611756 288 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 SDR42E1P4-201ENST00000620894 481 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 MIR3674-201ENST00000636576 68 ntBASIC1.89□□□□□ -2.11
YIPF1Q9Y548 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
YIPF1Q9Y548 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
YIPF1Q9Y548 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 RNU6-454P-201ENST00000364292 107 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.471-201ENST00000384312 102 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.526-201ENST00000384572 110 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 MRPL35P1-201ENST00000404272 572 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 RNA5SP450-201ENST00000411206 102 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 TOMM22P2-201ENST00000430735 237 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.88□□□□□ -2.11
YIPF1Q9Y548 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
YIPF1Q9Y548 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AC011406.1-201ENST00000512440 370 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AL121655.1-201ENST00000605811 308 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AC004467.1-201ENST00000615678 330 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AC010205.1-201ENST00000616668 449 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AC022513.1-201ENST00000624512 117 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 AP000553.5-201ENST00000641933 54 ntBASIC1.88□□□□□ -2.11
YIPF1Q9Y548 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
YIPF1Q9Y548 SNORA63-201ENST00000363450 132 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 RNU4-50P-201ENST00000364361 141 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
YIPF1Q9Y548 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 RNU6-101P-201ENST00000410323 104 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 RPEP5-201ENST00000441137 268 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.87□□□□□ -2.11
YIPF1Q9Y548 U8.20-201ENST00000459445 131 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 AC022616.4-201ENST00000522985 181 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.87□□□□□ -2.11
YIPF1Q9Y548 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.87□□□□□ -2.11
YIPF1Q9Y548 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 PART1_1.1-201ENST00000611761 217 ntBASIC1.87□□□□□ -2.11
YIPF1Q9Y548 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
YIPF1Q9Y548 MIR410-201ENST00000362222 80 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNA5SP276-201ENST00000362580 94 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-1240P-201ENST00000365155 104 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 AC117470.1-201ENST00000381974 330 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-639P-201ENST00000384074 107 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-1310P-201ENST00000384153 107 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 Y_RNA.551-201ENST00000384661 102 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-130P-201ENST00000411112 103 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 AC108667.1-201ENST00000428618 249 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 ATP5J2P3-201ENST00000451550 258 ntBASIC1.86□□□□□ -2.11
YIPF1Q9Y548 RNU6-397P-201ENST00000516226 104 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms