Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 Y_RNA.361-201ENST00000365515 120 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 MIR504-201ENST00000385065 83 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 MIR27B-201ENST00000385129 97 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 SNORD115-46-201ENST00000390982 71 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 RNU2-20P-201ENST00000410425 191 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 RN7SKP192-201ENST00000411291 327 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 SCARNA15.1-201ENST00000516384 125 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.720-201ENST00000517166 92 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 SUB1P4-201ENST00000566062 339 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 AC136932.1-201ENST00000574771 208 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 AC067747.1-201ENST00000608026 250 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 MIR6895-201ENST00000613497 78 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 U6.73-201ENST00000619194 103 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 U4.3-201ENST00000621047 82 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 AC099654.10-201ENST00000640395 161 ntBASIC1.93□□□□□ -2.1
LSM4Q9Y4Z0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 SNORA27.1-201ENST00000362604 124 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 Y_RNA.210-201ENST00000364161 110 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 SNORA80E-201ENST00000384744 137 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AL355497.1-201ENST00000406262 551 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AL158823.1-201ENST00000418441 478 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 ELOCP20-201ENST00000422460 345 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AC018634.1-201ENST00000437554 401 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 IPO7P1-201ENST00000442031 636 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AC005042.3-201ENST00000453230 174 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AC010655.3-201ENST00000478818 450 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-1143P-201ENST00000516125 104 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 SNORA40.15-201ENST00000516884 107 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LSM4Q9Y4Z0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNA5SP289-201ENST00000362332 137 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 MIR873-201ENST00000401120 77 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU4-53P-201ENST00000410828 140 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 Z98742.3-201ENST00000418637 326 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-436P-201ENST00000516171 114 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNA5SP320-201ENST00000516263 124 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-155P-201ENST00000516347 100 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU6-966P-201ENST00000516479 104 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 RNU7-110P-201ENST00000516891 62 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 MIR5094-201ENST00000578766 85 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 MIR4300-201ENST00000581016 96 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 AL359075.3-201ENST00000613288 217 ntBASIC1.91□□□□□ -2.1
LSM4Q9Y4Z0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LSM4Q9Y4Z0 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.1
LSM4Q9Y4Z0 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.162-201ENST00000363683 102 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP467-201ENST00000391274 118 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RPL21P1-201ENST00000399532 476 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RPS29P21-201ENST00000496272 170 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 MRPS35P2-201ENST00000508242 191 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RNU7-99P-201ENST00000516271 62 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RNY3P15-201ENST00000516297 97 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 RNU1-142P-201ENST00000516682 145 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC027419.1-201ENST00000522976 328 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC008737.2-201ENST00000599446 118 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC069114.2-201ENST00000604699 304 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 SNORD113-5-201ENST00000607261 78 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 MIR376A1-201ENST00000616574 68 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC005336.3-201ENST00000623833 2679 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.11
LSM4Q9Y4Z0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 SNORD81.1-201ENST00000363064 77 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 SNORA8-201ENST00000384574 139 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 MIR518C-201ENST00000384822 101 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 RNU6-1109P-201ENST00000391187 107 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AL031003.1-201ENST00000404229 172 ntBASIC1.89□□□□□ -2.11
LSM4Q9Y4Z0 AL135786.1-201ENST00000415892 214 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms