Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RNU6-199P-201ENST00000362954 107 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RNA5SP139-201ENST00000364340 117 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RNY3P5-201ENST00000384127 102 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 AC022018.1-201ENST00000430685 241 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RNA5SP20-201ENST00000515976 84 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RNU7-116P-201ENST00000516940 62 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 AC025647.1-201ENST00000517879 253 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 AC107016.2-201ENST00000547968 190 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 LARP7P3-201ENST00000579888 337 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 AC093732.2-201ENST00000607950 274 ntBASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PCDHA4Q9UN74 RNU6-851P-201ENST00000384565 107 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 SNORA44-201ENST00000384584 132 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 MIR128-1-201ENST00000384921 82 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 SNORA48.2-201ENST00000390926 124 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 MIR1278-201ENST00000408753 81 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AL135786.1-201ENST00000415892 214 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AC008267.6-201ENST00000441664 139 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 SCGB1D5P-201ENST00000515134 247 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AC027419.1-201ENST00000522976 328 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AC112693.2-201ENST00000556538 232 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 AC006435.5-201ENST00000624486 112 ntBASIC3.33□□□□□ -1.88
PCDHA4Q9UN74 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU6-418P-201ENST00000384035 107 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU6-1235P-201ENST00000384559 107 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 SNORA20-201ENST00000384662 132 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 U6atac.2-201ENST00000408644 118 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU4-43P-201ENST00000410628 137 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU7-197P-201ENST00000458836 62 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU6-498P-201ENST00000459468 107 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 AC010531.2-201ENST00000465012 153 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 SNORA74D-201ENST00000516404 141 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 RNU6-971P-201ENST00000516920 106 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA4Q9UN74 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 CD24P4-201ENST00000382840 243 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.420-201ENST00000384043 110 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 SNORD37.2-201ENST00000391075 66 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 AC008134.1-201ENST00000420943 193 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 RPL23AP83-201ENST00000434984 473 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 RNU6-437P-201ENST00000459408 95 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 RPL23AP54-201ENST00000495129 419 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 RNU6-63P-201ENST00000516690 95 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 SCARNA3-201ENST00000517097 143 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 MIR3646-201ENST00000578301 84 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 MIR1248-201ENST00000629190 106 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 MIR7157-201ENST00000635801 60 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 MIR7515-201ENST00000637837 67 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 ZNF702P-202ENST00000434269 1966 ntBASIC3.31□□□□□ -1.88
PCDHA4Q9UN74 RNU6-674P-201ENST00000363831 107 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.218-201ENST00000364218 104 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 RNU6-768P-201ENST00000384683 107 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC016909.1-201ENST00000415916 166 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 RPL23AP58-201ENST00000440453 469 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC090515.1-201ENST00000465295 476 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 RNU6-965P-201ENST00000516721 96 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC105245.1-201ENST00000581934 244 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC013412.1-201ENST00000610687 192 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 AC091953.5-201ENST00000622919 233 ntBASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHA4Q9UN74 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RNA5SP205-201ENST00000364653 136 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RNU6-117P-201ENST00000365415 107 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RNU6-438P-201ENST00000365561 103 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.542-201ENST00000384641 111 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 MIR218-1-201ENST00000384999 110 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 Y_RNA.629-201ENST00000411368 105 ntBASIC3.29□□□□□ -1.88
PCDHA4Q9UN74 RN7SKP101-201ENST00000411376 320 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms