Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RN7SL807P-201ENST00000470923 297 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RN7SL20P-201ENST00000488827 297 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 RNA5SP490-201ENST00000517141 136 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 AC025647.1-201ENST00000517879 253 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 AC096577.2-201ENST00000611455 153 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 AC009487.4-201ENST00000624969 3585 ntBASIC3.62□□□□□ -1.83
BRPF3Q9ULD4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 AC073325.2-201ENST00000339545 159 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 RNA5SP374-201ENST00000362939 125 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 VTRNA1-1-201ENST00000363120 99 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 SNORD50.2-201ENST00000365465 70 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 RNU6-449P-201ENST00000383914 107 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 RNU6-144P-201ENST00000383951 107 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 SNORD116-13-201ENST00000384408 92 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 MIR518C-201ENST00000384822 101 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 SNORD88.1-201ENST00000408684 91 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 RNU2-63P-201ENST00000410792 194 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 EBAG9P1-201ENST00000418955 543 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 AC006028.1-201ENST00000438379 402 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 AC117454.1-201ENST00000491120 168 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 MIR548AY-201ENST00000617669 107 ntBASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRPF3Q9ULD4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 SNORD15B-201ENST00000384714 146 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 MIR95-201ENST00000385072 81 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 AC008134.1-201ENST00000420943 193 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 snoU13.22-201ENST00000459428 104 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 RNA5SP20-201ENST00000515976 84 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 RNU7-115P-201ENST00000516433 55 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 MIR4446-201ENST00000578505 67 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 MIR5688-201ENST00000580619 83 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 MIR3651-201ENST00000630427 90 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.6□□□□□ -1.83
BRPF3Q9ULD4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 RNU1-23P-201ENST00000363361 144 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 SNORD46.1-201ENST00000364139 104 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 RNU6-743P-201ENST00000364151 106 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 MIR616-201ENST00000385293 97 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 AL606753.1-201ENST00000427435 87 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 AC008885.1-201ENST00000514930 301 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 SCARNA8-201ENST00000515924 131 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 RNU6-453P-201ENST00000516819 85 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 PRELID2P1-201ENST00000552837 301 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 MIR4724-201ENST00000579485 89 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 AC007318.2-201ENST00000620999 243 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 MIR622-201ENST00000638396 96 ntBASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BRPF3Q9ULD4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AL356292.1-201ENST00000283110 373 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 MIR367-201ENST00000362299 68 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 CR769767.1-201ENST00000436337 346 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AC104389.3-201ENST00000445629 235 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AC245047.8-201ENST00000456455 284 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AC010409.1-201ENST00000487382 476 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 RNU2-34P-201ENST00000516534 121 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 RNU6-1007P-201ENST00000516586 107 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AP001485.1-201ENST00000604799 199 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 AC090115.4-201ENST00000609970 188 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 FO624990.1-201ENST00000636373 85 ntBASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRPF3Q9ULD4 SNORA38-201ENST00000363946 132 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 RNU6-220P-201ENST00000390919 107 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 SNORA36B-201ENST00000410438 131 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AC016909.1-201ENST00000415916 166 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AC010531.2-201ENST00000465012 153 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 RN7SL297P-201ENST00000483161 293 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 RPL36AP21-201ENST00000490372 323 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 SNORA48.11-201ENST00000517015 89 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 MIR4431-201ENST00000579990 94 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AP003357.1-201ENST00000604497 148 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 AC006435.5-201ENST00000624486 112 ntBASIC3.57□□□□□ -1.84
BRPF3Q9ULD4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 SNORA38.1-201ENST00000364172 131 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.56□□□□□ -1.84
BRPF3Q9ULD4 SNORD113-1-201ENST00000365321 69 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms