Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AL031274.2-201ENST00000599419 203 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 MIR6840-201ENST00000611937 71 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.57□□□□□ -2
HDAC9Q9UKV0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
HDAC9Q9UKV0 MIR410-201ENST00000362222 80 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 RNU6-743P-201ENST00000364151 106 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 RNU6-806P-201ENST00000365147 105 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC019129.1-201ENST00000403786 261 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AL357139.1-201ENST00000407792 426 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 RAB28P5-201ENST00000427490 651 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC005002.2-201ENST00000438228 269 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC025465.3-201ENST00000510570 311 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 RNU6-635P-201ENST00000516651 102 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC008269.2-201ENST00000561915 1105 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC055872.1-201ENST00000570978 278 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 AC022202.1-201ENST00000613515 211 ntBASIC2.56□□□□□ -2
HDAC9Q9UKV0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
HDAC9Q9UKV0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HDAC9Q9UKV0 AL596028.1-201ENST00000326971 197 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 RNY1P10-201ENST00000363268 113 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 RNU6-770P-201ENST00000363929 105 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 SNORA16B-201ENST00000364674 135 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 MIR568-201ENST00000385036 95 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 MIR548B-201ENST00000385247 97 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
HDAC9Q9UKV0 AC093259.1-201ENST00000509755 300 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 MTCO2P24-201ENST00000515611 426 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.55□□□□□ -2
HDAC9Q9UKV0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.55□□□□□ -2
HDAC9Q9UKV0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 AC130454.1-201ENST00000622948 401 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 WWP1P1-201ENST00000466609 2769 ntBASIC2.55□□□□□ -2
HDAC9Q9UKV0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.54□□□□□ -2
HDAC9Q9UKV0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDAC9Q9UKV0 RNU6-626P-201ENST00000363354 107 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 RNU6-20P-201ENST00000384106 107 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HDAC9Q9UKV0 MTCYBP9-201ENST00000431021 303 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 AL731563.1-201ENST00000442202 214 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 AL137159.1-201ENST00000452808 512 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.54□□□□□ -2
HDAC9Q9UKV0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 LINC01399-202ENST00000458450 244 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 snoU13.18-201ENST00000459483 104 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.54□□□□□ -2
HDAC9Q9UKV0 SNORA40.15-201ENST00000516884 107 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 MIR4300-201ENST00000581016 96 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 AL109918.3-201ENST00000603072 338 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 AC008555.8-201ENST00000623602 2168 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 ZNF355P-201ENST00000427301 3216 ntBASIC2.54□□□□□ -2
HDAC9Q9UKV0 MIR340-201ENST00000362125 95 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.53□□□□□ -2
HDAC9Q9UKV0 SNORD63-201ENST00000384262 68 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 Y_RNA.462-201ENST00000384268 102 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 RNU6-937P-201ENST00000384325 106 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 MIR17-201ENST00000385012 84 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 SNORD115-46-201ENST00000390982 71 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.53□□□□□ -2
HDAC9Q9UKV0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.53□□□□□ -2
HDAC9Q9UKV0 MIR4753-201ENST00000585119 83 ntBASIC2.53□□□□□ -2
HDAC9Q9UKV0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
HDAC9Q9UKV0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 LINC02555-201ENST00000563933 1951 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.230-201ENST00000364348 109 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 RNU6-975P-201ENST00000384296 105 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 Y_RNA.570-201ENST00000384750 101 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 MIR29C-201ENST00000385231 88 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 RNU2-20P-201ENST00000410425 191 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 SRIP3-201ENST00000413200 219 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 TRMT112P2-201ENST00000512910 132 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 RNY3P15-201ENST00000516297 97 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 MIR376A1-201ENST00000616574 68 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 MIR3674-201ENST00000636576 68 ntBASIC2.52□□□□□ -2.01
HDAC9Q9UKV0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms