Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-418P-201ENST00000384035 107 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 Y_RNA.432-201ENST00000384087 111 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 Y_RNA.584-201ENST00000391090 114 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 RNA5SP511-201ENST00000410487 115 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.52□□□□□ -1.85
CNTN3Q9P232 AC023449.1-201ENST00000454464 154 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 RNU6-1299P-201ENST00000516316 100 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 AC090049.2-201ENST00000550377 109 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 AC015720.1-201ENST00000565251 277 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 MIR2682-201ENST00000580305 110 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 AL031274.2-201ENST00000599419 203 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 AC013412.1-201ENST00000610687 192 ntBASIC3.52□□□□□ -1.85
CNTN3Q9P232 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
CNTN3Q9P232 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTN3Q9P232 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTN3Q9P232 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CNTN3Q9P232 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 AL355596.1-201ENST00000565399 3996 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 AC093010.3-201ENST00000570269 15214 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTN3Q9P232 RPL30P4-201ENST00000429309 333 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 RPS12P18-201ENST00000442381 270 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.51□□□□□ -1.85
CNTN3Q9P232 RPS27P22-201ENST00000478056 241 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 RNU6-63P-201ENST00000516690 95 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 Y_RNA.757-201ENST00000578934 114 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 AC120024.3-201ENST00000603167 156 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.51□□□□□ -1.85
CNTN3Q9P232 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTN3Q9P232 AC138915.1-201ENST00000565427 1685 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CNTN3Q9P232 PWAR6-201ENST00000552334 4618 ntBASIC3.51□□□□□ -1.85
CNTN3Q9P232 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CNTN3Q9P232 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTN3Q9P232 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CNTN3Q9P232 RNU6-1082P-201ENST00000364574 107 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 RNU6-915P-201ENST00000364943 103 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 RNU6-44P-201ENST00000384045 107 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 MIR483-201ENST00000385070 76 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 RNA5SP293-201ENST00000410527 113 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 HMGN2P18-201ENST00000450680 270 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 RNA5SP153-201ENST00000516498 76 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 SCARNA3-201ENST00000517097 143 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 MIR3616-201ENST00000584070 92 ntBASIC3.5□□□□□ -1.85
CNTN3Q9P232 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CNTN3Q9P232 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTN3Q9P232 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.49□□□□□ -1.85
CNTN3Q9P232 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CNTN3Q9P232 RNA5SP374-201ENST00000362939 125 ntBASIC3.49□□□□□ -1.85
CNTN3Q9P232 AC063976.3-201ENST00000426849 329 ntBASIC3.49□□□□□ -1.85
CNTN3Q9P232 AC009969.1-201ENST00000438726 172 ntBASIC3.49□□□□□ -1.85
CNTN3Q9P232 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.49□□□□□ -1.85
CNTN3Q9P232 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.49□□□□□ -1.85
CNTN3Q9P232 MIR5739-201ENST00000619803 80 ntBASIC3.49□□□□□ -1.85
CNTN3Q9P232 RNU6-546P-201ENST00000383991 107 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 RNU6-484P-201ENST00000384016 107 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 RNU6-126P-201ENST00000516685 103 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.48□□□□□ -1.85
CNTN3Q9P232 AC090115.4-201ENST00000609970 188 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 MIR7153-201ENST00000637758 57 ntBASIC3.48□□□□□ -1.85
CNTN3Q9P232 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CNTN3Q9P232 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CNTN3Q9P232 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CNTN3Q9P232 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 Y_RNA.203-201ENST00000364106 102 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 RNU6-978P-201ENST00000364371 103 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 SNORA26-201ENST00000391286 122 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AC016909.1-201ENST00000415916 166 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AL513477.1-202ENST00000417061 214 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AL357134.1-201ENST00000445848 426 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 Y_RNA.712-201ENST00000517011 92 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 RNA5SP490-201ENST00000517141 136 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AL049861.1-201ENST00000603130 150 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 uc_338.4-201ENST00000616635 176 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 AL449363.1-201ENST00000617815 186 ntBASIC3.47□□□□□ -1.85
CNTN3Q9P232 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CNTN3Q9P232 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNTN3Q9P232 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
CNTN3Q9P232 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNTN3Q9P232 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNTN3Q9P232 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.46□□□□□ -1.85
CNTN3Q9P232 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms