Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AC027176.1-201ENST00000560204 514 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AC133485.4-201ENST00000561835 220 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AC138907.4-201ENST00000570107 226 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AC002076.2-201ENST00000617362 122 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 MIR6076-201ENST00000617521 113 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AF117829.1-206ENST00000621883 3802 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 U6.115-201ENST00000636045 103 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 RNU4-15P-201ENST00000362613 141 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 SNORA71.1-201ENST00000364523 117 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 RNU6-573P-201ENST00000383938 106 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 SNORA20B-201ENST00000384220 132 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.456-201ENST00000384232 111 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 MIR526A2-201ENST00000390198 65 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 RNA5SP201-201ENST00000410316 124 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 AL357552.1-201ENST00000445254 415 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 RPL23AP67-201ENST00000465341 474 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 GTF3AP2-201ENST00000557014 266 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 MIR4724-201ENST00000579485 89 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 AL031274.2-201ENST00000599419 203 ntBASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LMCD1Q9NZU5 MIR548A1-201ENST00000385041 97 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 MIRLET7F2-201ENST00000385277 83 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 RN7SKP220-201ENST00000410611 288 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.617-201ENST00000410920 90 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 RNU6-592P-201ENST00000411333 103 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 AC023141.4-201ENST00000412031 328 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 CYCSP48-201ENST00000417124 323 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 HSPE1P21-201ENST00000438283 308 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 RPL30P14-201ENST00000482744 348 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 AC145146.1-201ENST00000496370 254 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 RNU6-1061P-201ENST00000516530 99 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 SNORA70.19-201ENST00000516717 90 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 RN7SKP282-201ENST00000516824 299 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 HSPE1P18-201ENST00000517602 280 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 AP001318.4-201ENST00000616637 121 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
LMCD1Q9NZU5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 MIR367-201ENST00000362299 68 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 U8.1-201ENST00000362843 134 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.114-201ENST00000363265 113 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 U3.9-201ENST00000363823 204 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RNU6-728P-201ENST00000365375 104 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RNU6-597P-201ENST00000365620 102 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RNU6-1228P-201ENST00000391014 107 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 AL512604.1-201ENST00000404812 257 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RNU4-43P-201ENST00000410628 137 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RPL23AP82-202ENST00000427528 469 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 TOMM22P2-201ENST00000430735 237 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 AC117454.1-201ENST00000491120 168 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 MIR2682-201ENST00000580305 110 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 RPS15AP11-201ENST00000594193 385 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 AC120024.3-201ENST00000603167 156 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 AC091152.3-201ENST00000604227 325 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 AL121890.5-201ENST00000620848 304 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 Z82209.1-201ENST00000422141 2135 ntBASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.41□□□□□ -1.86
LMCD1Q9NZU5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LMCD1Q9NZU5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.4□□□□□ -1.86
LMCD1Q9NZU5 MIR548B-201ENST00000385247 97 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 SNORA26.7-201ENST00000391288 122 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 RNA5SP184-201ENST00000411071 108 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 EEF1A1P41-201ENST00000414667 207 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 RNA5SP367-201ENST00000516557 118 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 Y_RNA.692-201ENST00000516627 105 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 MIR4435-1-201ENST00000582552 80 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 HSPE1P7-201ENST00000604681 321 ntBASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.4□□□□□ -1.87
LMCD1Q9NZU5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMCD1Q9NZU5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms