Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC018448.1-201ENST00000552843 316 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AC015688.6-201ENST00000577737 104 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AL121890.5-201ENST00000620848 304 ntBASIC1.73□□□□□ -2.13
BLOC1S4Q9NUP1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 SNORA69.1-201ENST00000390904 137 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RNA5SP475-201ENST00000410568 110 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 ELOCP21-201ENST00000412558 336 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RBMX2P4-201ENST00000441256 376 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RPS27P1-201ENST00000450552 247 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RNU6-625P-201ENST00000459412 107 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 AC010469.2-201ENST00000496412 480 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RPL21P9-201ENST00000556149 474 ntBASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
BLOC1S4Q9NUP1 RNA5SP361-201ENST00000362686 118 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-99P-201ENST00000364721 107 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-203P-201ENST00000384038 104 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AL034345.1-201ENST00000407768 123 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 PGBD4P5-201ENST00000445958 426 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 MTND4P17-201ENST00000470444 350 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 RNU7-128P-201ENST00000517247 62 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC144568.1-201ENST00000520139 137 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 MIR3937-201ENST00000580135 106 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC022217.4-201ENST00000604389 163 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AL355073.2-201ENST00000612106 557 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 MIR8054-201ENST00000620877 86 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
BLOC1S4Q9NUP1 AC018630.2-201ENST00000534866 2403 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 RNU4-13P-201ENST00000364019 141 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR513A1-201ENST00000385138 129 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MRPL35P1-201ENST00000404272 572 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 AL929325.1-201ENST00000603096 117 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 AL645939.4-201ENST00000604495 135 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR1244-1-201ENST00000612829 85 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 AC040896.1-201ENST00000613819 479 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR1244-3-201ENST00000635744 85 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR1244-2-201ENST00000636449 85 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR3674-201ENST00000636576 68 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 MIR1244-4-202ENST00000636813 85 ntBASIC1.7□□□□□ -2.14
BLOC1S4Q9NUP1 SNORA20B-201ENST00000384220 132 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-310P-201ENST00000384655 107 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU4-14P-201ENST00000410858 122 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 MTND4P28-201ENST00000426217 387 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 AC005002.2-201ENST00000438228 269 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 AC097462.1-201ENST00000514125 324 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 SNORA40.9-201ENST00000515895 93 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-559P-201ENST00000516151 98 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU7-172P-201ENST00000517125 64 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 AC023157.2-201ENST00000540596 141 ntBASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-440P-201ENST00000390882 105 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 Y_RNA.646-201ENST00000410980 101 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 SNX2P2-201ENST00000424553 323 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AC022493.2-201ENST00000506122 481 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AC027419.1-201ENST00000522976 328 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AL442163.3-201ENST00000554110 156 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AL357075.2-201ENST00000614906 189 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 MIR6715A-201ENST00000615929 79 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 AL359757.2-201ENST00000624309 274 ntBASIC1.68□□□□□ -2.14
BLOC1S4Q9NUP1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 SNORD114-7-201ENST00000362520 77 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 Y_RNA.142-201ENST00000363491 102 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-60P-201ENST00000364792 103 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 Y_RNA.384-201ENST00000383909 102 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 Y_RNA.387-201ENST00000383918 102 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 RNU6-318P-201ENST00000384283 103 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 SNORD12B-201ENST00000410433 91 ntBASIC1.67□□□□□ -2.14
BLOC1S4Q9NUP1 RAB28P5-201ENST00000427490 651 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms