Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AL360085.1-201ENST00000604713 532 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AC022441.3-201ENST00000605737 136 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 AC131280.1-202ENST00000624067 4211 ntBASIC1.94□□□□□ -2.1
HINT3Q9NQE9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.94□□□□□ -2.1
HINT3Q9NQE9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
HINT3Q9NQE9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RNU6-862P-201ENST00000362804 105 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.145-201ENST00000363527 102 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.214-201ENST00000364201 112 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.243-201ENST00000364481 109 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.276-201ENST00000364732 109 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.446-201ENST00000384178 104 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 SNORA48.3-201ENST00000391081 134 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AL355796.1-201ENST00000406706 323 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RNU6-1199P-201ENST00000411249 104 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 ELOCP20-201ENST00000422460 345 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC099677.2-201ENST00000436385 175 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RN7SL429P-201ENST00000479090 223 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RN7SL489P-201ENST00000486185 223 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RN7SL327P-201ENST00000488659 223 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 MRPS35P2-201ENST00000508242 191 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC010598.1-201ENST00000510378 103 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RNU6-966P-201ENST00000516479 104 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 SNORA40.15-201ENST00000516884 107 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC008737.2-201ENST00000599446 118 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC006380.1-201ENST00000603598 186 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC005828.6-201ENST00000606610 232 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 AC011373.1-201ENST00000607270 237 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 RN7SL853P-201ENST00000617250 223 ntBASIC1.93□□□□□ -2.1
HINT3Q9NQE9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
HINT3Q9NQE9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 U8.2-201ENST00000363156 134 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.162-201ENST00000363683 102 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 SNORA20B-201ENST00000384220 132 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RN7SKP192-201ENST00000411291 327 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AL390729.2-201ENST00000416137 156 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RNVU1-2-201ENST00000516326 135 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 RNU6-155P-201ENST00000516347 100 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC027419.1-201ENST00000522976 328 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 MIR4300-201ENST00000581016 96 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 AC116312.1-201ENST00000606841 314 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 MIR6132-201ENST00000622083 109 ntBASIC1.92□□□□□ -2.1
HINT3Q9NQE9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HINT3Q9NQE9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 Y_RNA.105-201ENST00000363182 111 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RNU6-770P-201ENST00000363929 105 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 SNORD115-30-201ENST00000364117 82 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 SNORA70B-201ENST00000384210 135 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 SNORA48.1-201ENST00000390879 135 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RPL21P1-201ENST00000399532 476 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC096920.1-201ENST00000423991 241 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 MTND5P22-201ENST00000458380 195 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RNU6-327P-201ENST00000516270 127 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RNY3P15-201ENST00000516297 97 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 SCARNA16.3-201ENST00000516595 184 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 RNU7-110P-201ENST00000516891 62 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.91□□□□□ -2.1
HINT3Q9NQE9 MIR376A1-201ENST00000616574 68 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 AC006435.5-201ENST00000624486 112 ntBASIC1.91□□□□□ -2.1
HINT3Q9NQE9 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.1
HINT3Q9NQE9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HINT3Q9NQE9 RNU1-96P-201ENST00000364163 162 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 SNORD115-46-201ENST00000390982 71 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AL355497.1-201ENST00000406262 551 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 U3.40-201ENST00000408706 208 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 RNU6-121P-201ENST00000410525 99 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 MTND2P23-201ENST00000422990 651 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 CST2P1-201ENST00000425770 87 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
HINT3Q9NQE9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms