Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MTCO1P44-201ENST00000441935 243 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 RPL39P40-201ENST00000445481 146 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 CYCSP35-201ENST00000451978 304 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 SNORD11-201ENST00000459124 84 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 RPL23AP67-201ENST00000465341 474 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AC021205.2-201ENST00000480069 347 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 OR9P1P-201ENST00000496431 281 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 RNU5E-3P-201ENST00000515913 68 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 MIR4662B-201ENST00000579498 81 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AC019176.2-201ENST00000611579 315 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 Pinc.1-201ENST00000616452 154 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 U6.95-201ENST00000636931 70 ntBASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.31□□□□□ -1.88
BHLHE41Q9C0J9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 RNA5SP119-201ENST00000362715 117 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 RNA5SP124-201ENST00000362739 110 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 MLLT10P1-201ENST00000418346 262 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 AC010401.1-201ENST00000463867 348 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 PDCD5P2-201ENST00000507570 312 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 RNU7-149P-201ENST00000516739 59 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 MIR3914-2-201ENST00000637339 95 ntBASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
BHLHE41Q9C0J9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 RNU1-23P-201ENST00000363361 144 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 MIR520G-201ENST00000385064 90 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 RNY4P18-201ENST00000391107 89 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 RNU2-63P-201ENST00000410792 194 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AL035423.1-201ENST00000420331 213 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AL158147.1-201ENST00000443970 75 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 PRSS3P4-201ENST00000453323 162 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC023141.11-201ENST00000508864 202 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC093259.1-201ENST00000509755 300 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 SNORA18.4-201ENST00000516440 124 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 Y_RNA.690-201ENST00000516603 95 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 RNU6-856P-201ENST00000516959 98 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC097639.2-201ENST00000603159 172 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 U6.73-201ENST00000619194 103 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BHLHE41Q9C0J9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 Y_RNA.114-201ENST00000363265 113 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 MIR562-201ENST00000384894 95 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AP001486.1-201ENST00000463339 476 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AC110768.1-201ENST00000509222 400 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 RN7SKP18-201ENST00000516005 275 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 SNORA70.18-201ENST00000516696 98 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AC073413.2-201ENST00000604332 360 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.28□□□□□ -1.88
BHLHE41Q9C0J9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
BHLHE41Q9C0J9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
BHLHE41Q9C0J9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 SNORA73.2-201ENST00000364946 201 ntBASIC3.27□□□□□ -1.89
BHLHE41Q9C0J9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms