Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SNORA40.14-201ENST00000516543 86 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.711-201ENST00000516993 102 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC022868.1-201ENST00000517767 391 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 VN1R91P-201ENST00000594377 169 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AL357075.2-201ENST00000614906 189 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC007485.1-201ENST00000616755 206 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC130454.1-201ENST00000622948 401 ntBASIC1.82□□□□□ -2.12
NECTIN4Q96NY8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.28-201ENST00000362554 111 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.122-201ENST00000363331 96 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RNU6-438P-201ENST00000365561 103 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.415-201ENST00000384012 112 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RNU6-308P-201ENST00000390957 107 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 MIR548P-201ENST00000408336 84 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.605-201ENST00000410577 105 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 MTND1P14-201ENST00000427400 950 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 AL357134.1-201ENST00000445848 426 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.661-201ENST00000516003 99 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RNU6-475P-201ENST00000516073 104 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1153P-201ENST00000516760 105 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 RN7SKP295-201ENST00000517264 153 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 CYCSP23-201ENST00000519781 313 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 MIR5188-201ENST00000583467 113 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 LINC02555-201ENST00000563933 1951 ntBASIC1.81□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.80-201ENST00000362996 102 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.148-201ENST00000363557 117 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-694P-201ENST00000364071 147 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-879P-201ENST00000364328 108 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1305P-201ENST00000364353 104 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 SNORD87-201ENST00000364849 89 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-418P-201ENST00000384035 107 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-708P-201ENST00000384217 107 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.485-201ENST00000384395 102 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1026P-201ENST00000384465 108 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR548B-201ENST00000385247 97 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR1302-11-201ENST00000408051 138 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR1302-9-201ENST00000408365 138 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR1302-10-201ENST00000408734 138 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC112492.4-201ENST00000456549 352 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RPL36AP21-201ENST00000490372 323 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC074133.1-201ENST00000515696 183 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNA5SP445-201ENST00000515889 115 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1012P-201ENST00000516606 109 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC091144.1-201ENST00000519573 138 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR3171-201ENST00000584270 74 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR1302-2-201ENST00000607096 138 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC006157.1-201ENST00000611750 366 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 AC022140.2-201ENST00000623500 188 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.8□□□□□ -2.12
NECTIN4Q96NY8 MIR410-201ENST00000362222 80 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.27-201ENST00000362540 103 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.39-201ENST00000362620 98 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.132-201ENST00000363421 102 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 RNU6-727P-201ENST00000363592 107 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 U3.8-201ENST00000363675 217 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 Y_RNA.645-201ENST00000391229 102 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 AC139712.2-201ENST00000424302 339 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 AC009474.2-201ENST00000451383 136 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 PCNPP5-201ENST00000452246 481 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 RPL26P26-201ENST00000480251 434 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 RNU6-948P-201ENST00000516374 107 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 AC006600.1-201ENST00000572529 153 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 MIR4753-201ENST00000585119 83 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
NECTIN4Q96NY8 AL391987.6-201ENST00000305671 199 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 RNU6-23P-201ENST00000363283 107 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 RNA5SP493-201ENST00000364115 91 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 RNU6-392P-201ENST00000364926 101 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 SNORA22B-201ENST00000383876 138 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 AL078595.1-201ENST00000404458 226 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 MIR1185-2-201ENST00000408687 86 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 SNORD12B-201ENST00000410433 91 ntBASIC1.78□□□□□ -2.12
NECTIN4Q96NY8 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms