Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 MIR5195-201ENST00000583555 115 ntBASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 AC243994.1-201ENST00000618627 109 ntBASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 AC007336.1-201ENST00000576365 3828 ntBASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.3□□□□□ -1.72
MS4A3Q96HJ5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 RNU6-833P-201ENST00000363486 107 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 Y_RNA.443-201ENST00000384135 111 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 AC008033.2-201ENST00000542626 177 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 YWHAEP2-201ENST00000580066 112 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 YWHAEP3-201ENST00000582767 121 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 AC087385.3-201ENST00000620477 187 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 AC103706.3-201ENST00000636297 85 ntBASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MS4A3Q96HJ5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 AC245060.5-201ENST00000610778 3293 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 Y_RNA.12-201ENST00000362393 112 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 Y_RNA.36-201ENST00000362602 112 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 MIR633-201ENST00000384821 98 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 RNA5SP252-201ENST00000391131 119 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 HMGN1P33-201ENST00000432945 451 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 AC091390.1-201ENST00000433904 331 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 RNA5SP392-201ENST00000516905 112 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 MIR5739-201ENST00000619803 80 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 MIR8065-201ENST00000620577 100 ntBASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A3Q96HJ5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 RNU1-23P-201ENST00000363361 144 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 MIR95-201ENST00000385072 81 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 MIR550A3-201ENST00000390735 95 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 RNU2-48P-201ENST00000410694 191 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 COX6B1P1-201ENST00000415962 213 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 AC009220.1-201ENST00000451614 275 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 MIR4511-201ENST00000582784 87 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 AC005000.2-201ENST00000605468 310 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 AL022401.1-201ENST00000619498 108 ntBASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MS4A3Q96HJ5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 RNU1-83P-201ENST00000363426 164 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 RNA5SP28-201ENST00000363841 119 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 MIR942-201ENST00000401111 86 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SCARNA17.1-201ENST00000516211 143 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SCARNA17.2-201ENST00000516334 143 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 AC104027.1-201ENST00000521887 300 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 MIR3934-201ENST00000579806 107 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 MIR4536-1-201ENST00000583537 88 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 AC104996.3-201ENST00000590718 94 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SCARNA17.4-201ENST00000614296 143 ntBASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.26□□□□□ -1.73
MS4A3Q96HJ5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
MS4A3Q96HJ5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MS4A3Q96HJ5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MS4A3Q96HJ5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MS4A3Q96HJ5 SNORA72.6-201ENST00000384520 129 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms