Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR4524B-201ENST00000581569 115 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 AC005899.2-201ENST00000584353 90 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 AC104260.1-201ENST00000616660 539 ntBASIC1.26□□□□□ -2.21
PTP4A1Q93096 RNU6-1001P-201ENST00000411265 100 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 EIF1P2-201ENST00000428233 350 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.25□□□□□ -2.21
PTP4A1Q93096 RNU6-322P-201ENST00000516010 103 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 RNU6-1278P-201ENST00000516130 107 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 Y_RNA.708-201ENST00000516950 96 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.25□□□□□ -2.21
PTP4A1Q93096 AC015720.1-201ENST00000565251 277 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 MIR5701-3-201ENST00000578890 82 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.25□□□□□ -2.21
PTP4A1Q93096 MIR5701-1-201ENST00000585138 82 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 BNIP3P10-201ENST00000605360 577 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.25□□□□□ -2.21
PTP4A1Q93096 MIR5701-2-201ENST00000615634 82 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 AC002553.4-201ENST00000616896 331 ntBASIC1.25□□□□□ -2.21
PTP4A1Q93096 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PTP4A1Q93096 RNY1P16-201ENST00000363063 111 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 RNU6-879P-201ENST00000364328 108 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 RNU4-40P-201ENST00000364351 143 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 SNORA20B-201ENST00000384220 132 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 Y_RNA.498-201ENST00000384460 102 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 RNU6-1050P-201ENST00000410388 107 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 PCNPP5-201ENST00000452246 481 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.24□□□□□ -2.21
PTP4A1Q93096 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.24□□□□□ -2.21
PTP4A1Q93096 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.24□□□□□ -2.21
PTP4A1Q93096 AL645939.4-201ENST00000604495 135 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 PISRT1.1-201ENST00000616930 107 ntBASIC1.24□□□□□ -2.21
PTP4A1Q93096 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PTP4A1Q93096 ZNF72P-201ENST00000425869 1908 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU6-199P-201ENST00000362954 107 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 Y_RNA.86-201ENST00000363020 111 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU1-22P-201ENST00000363334 158 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU6-457P-201ENST00000363999 107 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU6-407P-201ENST00000365280 104 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU6-376P-201ENST00000384731 106 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 MIR329-1-201ENST00000385028 80 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 MTND3P8-201ENST00000412909 339 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AL589823.1-201ENST00000429577 183 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RPS3AP52-201ENST00000435639 297 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AC026782.1-201ENST00000512952 449 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.23□□□□□ -2.21
PTP4A1Q93096 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.23□□□□□ -2.21
PTP4A1Q93096 AF235103.2-201ENST00000525753 346 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 GHRLOS.1-201ENST00000610995 70 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 AC068647.2-201ENST00000637380 353 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
PTP4A1Q93096 RNU6-1145P-201ENST00000384246 107 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNU6-505P-201ENST00000384427 107 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNU6-601P-201ENST00000384540 107 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNU6-482P-201ENST00000391068 107 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 MIR548K-201ENST00000408406 116 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 Y_RNA.594-201ENST00000410373 140 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNA5SP475-201ENST00000410568 110 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNA5SP20-201ENST00000515976 84 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNU6-718P-201ENST00000516166 105 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC105029.1-201ENST00000520250 669 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AP002004.2-201ENST00000531656 154 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 MIR4303-201ENST00000581299 66 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AL357312.1-201ENST00000603879 298 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 BX284668.6-201ENST00000606899 438 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC093783.1-201ENST00000612976 329 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 AC106754.2-201ENST00000623006 233 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.22□□□□□ -2.21
PTP4A1Q93096 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PTP4A1Q93096 Y_RNA.72-201ENST00000362894 103 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 Y_RNA.482-201ENST00000384377 111 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PTP4A1Q93096 RNA5SP482-201ENST00000391269 118 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 MIR548F5-201ENST00000408421 86 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.21□□□□□ -2.22
PTP4A1Q93096 AC018710.1-201ENST00000506509 158 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
PTP4A1Q93096 AC125232.2-201ENST00000592457 143 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 AC005014.2-201ENST00000607795 599 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.21□□□□□ -2.22
PTP4A1Q93096 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
PTP4A1Q93096 SNORA27.1-201ENST00000362604 124 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 Y_RNA.267-201ENST00000364679 109 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 RNU6-1310P-201ENST00000384153 107 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.2□□□□□ -2.22
PTP4A1Q93096 MIR548F1-201ENST00000408667 84 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 AC018865.2-201ENST00000423631 129 ntBASIC1.2□□□□□ -2.22
PTP4A1Q93096 RAB28P5-201ENST00000427490 651 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms