Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 RNU6-409P-201ENST00000384114 104 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 U8.11-201ENST00000384699 133 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MIR30B-201ENST00000384850 88 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MIR183-201ENST00000384958 110 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MIR605-201ENST00000385078 83 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 Z92545.1-201ENST00000411782 234 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 HMGN2P31-201ENST00000432430 273 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 U8.18-201ENST00000459285 133 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 RNA5SP446-201ENST00000515955 82 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MIR3690-201ENST00000580266 75 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MIR4668-201ENST00000582284 70 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 Y_RNA.773-201ENST00000607168 90 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.85□□□□□ -1.79
SNIP1Q8TAD8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 Y_RNA.96-201ENST00000363092 109 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 RNA5SP151-201ENST00000365632 117 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 SNORA18-201ENST00000384416 132 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 RPS12P18-201ENST00000442381 270 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 RN7SL323P-201ENST00000494712 295 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 MIR5684-201ENST00000585074 65 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 HSPE1P19-201ENST00000603327 295 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 AC073413.2-201ENST00000604332 360 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 U6.105-201ENST00000637379 88 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 AC017071.1-201ENST00000564407 2204 ntBASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
SNIP1Q8TAD8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SNIP1Q8TAD8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.8
SNIP1Q8TAD8 ZNF271P-202ENST00000465539 1970 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 SNORA31-201ENST00000362607 130 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 RNU6-438P-201ENST00000365561 103 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 SNORD38C-201ENST00000384381 69 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 RNU1-44P-201ENST00000384453 163 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 MIR1183-201ENST00000408856 89 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.611-201ENST00000410682 108 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 MIR1911-201ENST00000410783 80 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AC097463.2-201ENST00000421074 142 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AC006011.1-201ENST00000442758 349 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 SNORD36C-201ENST00000516733 66 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AL513534.2-201ENST00000603836 250 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 U3.45-201ENST00000607547 219 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 MIR6868-201ENST00000611215 58 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AL359075.3-201ENST00000613288 217 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 MIR203B-201ENST00000636080 86 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 AC006160.2-201ENST00000637708 154 ntBASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
SNIP1Q8TAD8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 RNU1-15P-201ENST00000353977 144 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 MIR126-201ENST00000362291 85 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.37-201ENST00000362606 108 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 RNU4-67P-201ENST00000364569 141 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 SNORD45B-201ENST00000364617 72 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 SNORA14A-201ENST00000364773 135 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 AC010099.1-201ENST00000455434 375 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 RNU7-23P-201ENST00000459465 62 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 AC006445.1-201ENST00000491925 405 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 RNU6-1291P-201ENST00000516591 104 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 Y_RNA.705-201ENST00000516862 110 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 AC087499.8-201ENST00000578406 226 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 AC087685.1-201ENST00000587507 141 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 AC090115.4-201ENST00000609970 188 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 uc_338.14-201ENST00000613162 166 ntBASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.82□□□□□ -1.8
SNIP1Q8TAD8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 LINC02471-203ENST00000641941 4752 ntBASIC3.81□□□□□ -1.8
SNIP1Q8TAD8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms