Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-318P-201ENST00000384283 103 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 MIR559-201ENST00000385188 96 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 SNORA40.18-201ENST00000391200 128 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.592-201ENST00000410274 109 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AC096644.2-201ENST00000429278 159 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AC073910.1-201ENST00000445047 438 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 snoU13.23-201ENST00000458863 104 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RPL36AP21-201ENST00000490372 323 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU7-4P-201ENST00000516961 62 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-699P-201ENST00000517081 110 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AC144568.1-201ENST00000520139 137 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AC027419.1-201ENST00000522976 328 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 AC006026.1-201ENST00000444025 1803 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RNU1-42P-201ENST00000364033 160 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA4.2-201ENST00000365313 147 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-1040P-201ENST00000383974 107 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-926P-201ENST00000384075 107 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.498-201ENST00000384460 102 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RNA5SP323-201ENST00000391094 133 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 SNORD12B-201ENST00000410433 91 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 ELOCP21-201ENST00000412558 336 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 CST2P1-201ENST00000425770 87 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MTND4P28-201ENST00000426217 387 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 snoU13.9-201ENST00000458927 103 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 AC025465.3-201ENST00000510570 311 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RN7SKP49-201ENST00000516675 260 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-250P-201ENST00000516958 103 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 CYCSP23-201ENST00000519781 313 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MIR4524B-201ENST00000581569 115 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 AC080078.3-201ENST00000605407 463 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 AL353149.1-201ENST00000610667 244 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 MIR8063-201ENST00000621930 81 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 ZNF72P-201ENST00000425869 1908 ntBASIC1.27□□□□□ -2.21
CCDC71LQ8N9Z2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 MT-TD-201ENST00000387419 68 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 EBAG9P1-201ENST00000418955 543 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-625P-201ENST00000459412 107 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 RAB11AP2-201ENST00000545905 639 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 AC018448.1-201ENST00000552843 316 ntBASIC1.26□□□□□ -2.21
CCDC71LQ8N9Z2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 RNU4-79P-201ENST00000362764 141 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-271P-201ENST00000363858 105 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-1264P-201ENST00000383891 107 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 MIR628-201ENST00000385229 95 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 RNA5SP475-201ENST00000410568 110 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 AC099799.1-201ENST00000439809 192 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA40.9-201ENST00000515895 93 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.661-201ENST00000516003 99 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 MIR2355-201ENST00000517199 87 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 SNORA77B-201ENST00000578179 125 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 MIR4255-201ENST00000579351 72 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 AL008636.1-201ENST00000625038 1018 ntBASIC1.25□□□□□ -2.21
CCDC71LQ8N9Z2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-203P-201ENST00000384038 104 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.428-201ENST00000384078 102 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 MIR517C-201ENST00000385103 95 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 Y_RNA.579-201ENST00000390939 94 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RNA5SP109-201ENST00000391010 116 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AF228730.4-201ENST00000421457 183 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RNU7-152P-201ENST00000458982 64 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 SNORD65B-201ENST00000459126 73 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RPL26P26-201ENST00000480251 434 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AL163195.1-201ENST00000496941 348 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AC108210.2-201ENST00000503681 201 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AC074133.1-201ENST00000515696 183 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RNU6-408P-201ENST00000515910 100 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 RNU1-142P-201ENST00000516682 145 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 SNORD116.3-201ENST00000517176 78 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AL137100.2-201ENST00000555786 315 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
CCDC71LQ8N9Z2 LARP7P1-201ENST00000605576 316 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms