Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 SNORD50.2-201ENST00000365465 70 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 Y_RNA.398-201ENST00000383952 99 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-1248P-201ENST00000391096 64 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 EIF4EP4-201ENST00000424916 578 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 RPL36AP48-201ENST00000485521 314 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC140059.1-201ENST00000489238 361 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 RNU2-44P-201ENST00000516795 194 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC009127.3-201ENST00000570531 403 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 MIR4648-201ENST00000580107 72 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 MIR3605-201ENST00000583214 100 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC006380.1-201ENST00000603598 186 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AC104465.1-201ENST00000611365 139 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 SNORD114-30-201ENST00000364448 72 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 SNORA26.5-201ENST00000391215 123 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 MIR548I2-201ENST00000408348 149 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AL135786.1-201ENST00000415892 214 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 U8.19-201ENST00000459095 133 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-107P-201ENST00000516643 102 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 RNU1-117P-201ENST00000517041 158 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 IGKV3-31-201ENST00000523109 329 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AC002064.3-201ENST00000623448 346 ntBASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SLC44A3Q8N4M1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.65□□□□□ -1.98
SLC44A3Q8N4M1 RNU1-72P-201ENST00000362976 153 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 U3.8-201ENST00000363675 217 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-704P-201ENST00000364162 103 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 RNA5SP240-201ENST00000365355 128 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 RNU4-17P-201ENST00000365598 141 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 MIR518C-201ENST00000384822 101 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 MIR181A2-201ENST00000384863 110 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 MIR613-201ENST00000385248 95 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.580-201ENST00000391004 95 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AL590004.2-201ENST00000404787 371 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AC009414.1-201ENST00000427200 443 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 Z96811.1-201ENST00000445880 108 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 snoU13.23-201ENST00000458863 104 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 RPS27P26-201ENST00000494583 239 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AC136628.3-201ENST00000521868 290 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 AC091564.4-201ENST00000533934 2194 ntBASIC2.65□□□□□ -1.99
SLC44A3Q8N4M1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.7-201ENST00000362352 102 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.121-201ENST00000363309 113 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.412-201ENST00000384001 104 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 MIR548B-201ENST00000385247 97 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-381P-201ENST00000391259 108 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 RN7SKP223-201ENST00000410582 62 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 RPS29P6-201ENST00000438196 145 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 SRIP1-201ENST00000489235 288 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 RN7SL636P-201ENST00000497504 294 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 AC015712.3-201ENST00000559380 164 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 MIR4635-201ENST00000583759 79 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 AC023043.3-201ENST00000593113 385 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 U6.115-201ENST00000636045 103 ntBASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SLC44A3Q8N4M1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.8-201ENST00000362353 102 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.75-201ENST00000362927 97 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-324P-201ENST00000363957 106 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.238-201ENST00000364441 102 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.272-201ENST00000364696 102 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 RNU6-1130P-201ENST00000365434 107 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 SNORA72.4-201ENST00000384174 132 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 MIR586-201ENST00000385035 97 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 MIR767-201ENST00000390228 109 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AC097463.2-201ENST00000421074 142 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 HMGN2P9-201ENST00000476875 229 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 RPL17P51-201ENST00000605218 238 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
SLC44A3Q8N4M1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 Y_RNA.23-201ENST00000362496 106 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 RNU2-2P-201ENST00000410396 191 ntBASIC2.62□□□□□ -1.99
SLC44A3Q8N4M1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms