Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.107-201ENST00000363190 121 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 SNORA63D-201ENST00000364359 132 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 SNORA2.2-201ENST00000365473 135 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 MIR548D2-201ENST00000384955 97 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 AC026402.1-201ENST00000513642 170 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 RNU6-856P-201ENST00000516959 98 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 AC004486.1-201ENST00000546846 233 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 AC034229.5-201ENST00000624258 185 ntBASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC116Q8IYX3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 ZNF271P-202ENST00000465539 1970 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 MIR126-201ENST00000362291 85 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.265-201ENST00000364677 108 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.410-201ENST00000383992 113 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 MIR2116-201ENST00000517221 80 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC116Q8IYX3 ZNF720P1-201ENST00000562403 1939 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC018630.2-201ENST00000534866 2403 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 SPRR2C-201ENST00000290702 219 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 RNY1P10-201ENST00000363268 113 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 RNU11-5P-201ENST00000391216 129 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 U8.17-201ENST00000391292 132 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 MIR548O-201ENST00000408583 114 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC244505.4-201ENST00000434905 287 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 SSXP5-201ENST00000443473 287 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 SNORA31.1-201ENST00000515993 133 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 SNORA31.5-201ENST00000516190 133 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 RNU7-99P-201ENST00000516271 62 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 YPEL5P3-201ENST00000547227 352 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AL360157.1-201ENST00000565962 87 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 AC007229.1-201ENST00000590455 412 ntBASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC116Q8IYX3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 MIR372-201ENST00000362225 67 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU6-743P-201ENST00000364151 106 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU1-13P-201ENST00000384499 162 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 SNORA48.8-201ENST00000391324 134 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AC060773.1-201ENST00000421698 310 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AL139247.1-201ENST00000422768 325 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AC009414.1-201ENST00000427200 443 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RPL39P25-201ENST00000449384 154 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU7-164P-201ENST00000459221 62 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 PHBP14-201ENST00000512887 367 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU7-70P-201ENST00000516941 66 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNU7-128P-201ENST00000517247 62 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AC025521.1-201ENST00000621624 286 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 MIR6500-201ENST00000622700 86 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AL162726.3-218ENST00000636401 95 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 AC080128.1-201ENST00000474389 1917 ntBASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC116Q8IYX3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 Y_RNA.267-201ENST00000364679 109 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 AL359837.1-201ENST00000381357 287 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 RNU6-546P-201ENST00000383991 107 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 MIR802-201ENST00000390235 94 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 AC123900.1-201ENST00000420390 96 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 AL117339.2-201ENST00000430475 180 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 RNU7-123P-201ENST00000515911 60 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 MIR3163-201ENST00000581592 73 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 MIR6079-201ENST00000635807 62 ntBASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC116Q8IYX3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms