Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.243-201ENST00000364481 109 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-1289P-201ENST00000384431 106 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 MIR561-201ENST00000385216 97 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 MIR764-201ENST00000390811 85 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 RNU2-48P-201ENST00000410694 191 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 MTND5P15-201ENST00000434246 349 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC016925.1-201ENST00000458303 298 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 RNU4-71P-201ENST00000516258 113 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.679-201ENST00000516416 91 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 RN7SKP40-201ENST00000517211 242 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC130289.1-201ENST00000577321 73 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC009779.6-201ENST00000603972 165 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 snoZ196.1-201ENST00000625269 89 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SFTPA1Q8IWL2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.274-201ENST00000364714 101 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.590-201ENST00000410140 107 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 RN7SKP192-201ENST00000411291 327 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 AC092427.1-202ENST00000430569 476 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 AC018868.1-201ENST00000491307 315 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 SNORD116-28-201ENST00000516123 91 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-56P-201ENST00000516986 93 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 AC027419.1-201ENST00000522976 328 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.122-201ENST00000363331 96 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RNU1-91P-201ENST00000364746 163 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 SNORD58.1-201ENST00000391313 66 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RNU2-61P-201ENST00000411069 191 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-948P-201ENST00000516374 107 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RN7SKP282-201ENST00000516824 299 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.37□□□□□ -2.03
SFTPA1Q8IWL2 UBE2WP1-201ENST00000362030 340 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 MIR21-201ENST00000362134 72 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-200P-201ENST00000364743 107 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 MIR1298-201ENST00000408783 112 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AL135786.1-201ENST00000415892 214 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC024067.1-201ENST00000426199 223 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-221P-201ENST00000459541 99 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC010531.2-201ENST00000465012 153 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC093259.1-201ENST00000509755 300 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC007536.1-201ENST00000533382 349 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SFTPA1Q8IWL2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 AL023284.1-201ENST00000403956 276 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 AL355796.1-201ENST00000406706 323 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 AC009310.1-201ENST00000414414 451 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 MIR4769-201ENST00000584126 77 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 MIR6733-201ENST00000635723 61 ntBASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SFTPA1Q8IWL2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.217-201ENST00000364214 105 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 RNY1-201ENST00000364228 113 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.292-201ENST00000364904 97 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 Y_RNA.297-201ENST00000364950 91 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 SNORA20B-201ENST00000384220 132 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 RNU6-855P-201ENST00000410395 104 ntBASIC2.34□□□□□ -2.03
SFTPA1Q8IWL2 RNU2-64P-201ENST00000411315 191 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms