Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 AC018630.2-201ENST00000534866 2403 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 RNU6-137P-201ENST00000363680 108 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AC245047.3-201ENST00000429428 127 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AC245517.4-201ENST00000448601 281 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS36Q86VN1 SNORD65B-201ENST00000459126 73 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AC010469.2-201ENST00000496412 480 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 Y_RNA.683-201ENST00000516508 93 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AF235103.2-201ENST00000525753 346 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS36Q86VN1 AC005014.2-201ENST00000607795 599 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 U6.73-201ENST00000619194 103 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 MIR8054-201ENST00000620877 86 ntBASIC1.27□□□□□ -2.21
VPS36Q86VN1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU6-440P-201ENST00000390882 105 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU6-510P-201ENST00000391239 108 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNA5SP247-201ENST00000411181 105 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS36Q86VN1 TOMM22P2-201ENST00000430735 237 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 U8.22-201ENST00000459141 133 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 AC018710.1-201ENST00000506509 158 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU7-128P-201ENST00000517247 62 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 APOOP3-201ENST00000536787 586 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS36Q86VN1 MIR4438-201ENST00000585271 93 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 AC009229.3-201ENST00000608056 282 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 MIR8070-201ENST00000616510 88 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 AC106754.2-201ENST00000623006 233 ntBASIC1.26□□□□□ -2.21
VPS36Q86VN1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS36Q86VN1 RNU6-874P-201ENST00000362390 105 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNA5SP361-201ENST00000362686 118 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNU6-879P-201ENST00000364328 108 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNU6-53P-201ENST00000365367 106 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNU6-601P-201ENST00000384540 107 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
VPS36Q86VN1 MIR190B-201ENST00000401119 79 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 MIR548K-201ENST00000408406 116 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 FCF1P9-201ENST00000412546 282 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 MTND3P8-201ENST00000412909 339 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC074085.1-201ENST00000413598 418 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS36Q86VN1 RPL23AP50-201ENST00000434149 455 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 MTND1P4-201ENST00000435196 415 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 MTND1P34-201ENST00000438556 671 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS36Q86VN1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS36Q86VN1 MTND3P10-201ENST00000450967 341 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 HMGN1P7-201ENST00000491722 313 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC022868.1-201ENST00000517767 391 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC011712.1-201ENST00000588959 234 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC125232.2-201ENST00000592457 143 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AL357075.2-201ENST00000614906 189 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 AC139792.2-201ENST00000624218 587 ntBASIC1.25□□□□□ -2.21
VPS36Q86VN1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
VPS36Q86VN1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
VPS36Q86VN1 RNY1P16-201ENST00000363063 111 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 AC092423.1-201ENST00000430165 186 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 UQCRBP2-201ENST00000447827 297 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 AC022432.1-201ENST00000595739 310 ntBASIC1.24□□□□□ -2.21
VPS36Q86VN1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
VPS36Q86VN1 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 SNORD33-201ENST00000362761 85 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RNU6-700P-201ENST00000391043 107 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 MRPL42P3-201ENST00000401492 326 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RN7SKP200-201ENST00000410564 320 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS36Q86VN1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS36Q86VN1 AC107399.1-201ENST00000451226 265 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RNU7-99P-201ENST00000516271 62 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS36Q86VN1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS36Q86VN1 AC005668.1-201ENST00000571142 476 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 MIR1244-1-201ENST00000612829 85 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS36Q86VN1 MIR1244-3-201ENST00000635744 85 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 MIR1244-2-201ENST00000636449 85 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 MIR1244-4-202ENST00000636813 85 ntBASIC1.23□□□□□ -2.21
VPS36Q86VN1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms