Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 U2.9-201ENST00000615427 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.11-201ENST00000616345 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.2-201ENST00000616535 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.3-201ENST00000617785 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.19-201ENST00000618602 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 RNU2-1-201ENST00000618664 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.6-201ENST00000619225 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.5-201ENST00000619465 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 U2.10-201ENST00000620268 191 ntBASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LRRTM3Q86VH5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.97
LRRTM3Q86VH5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 HMGN2P34-201ENST00000437647 269 ntBASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP20-201ENST00000515976 84 ntBASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP282-201ENST00000516355 108 ntBASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC010900.2-201ENST00000604508 210 ntBASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 AC022202.1-201ENST00000613515 211 ntBASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRRTM3Q86VH5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 CENPCP1-201ENST00000533085 2578 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 RNU6-23P-201ENST00000363283 107 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.275-201ENST00000364726 110 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.277-201ENST00000364754 102 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP126-201ENST00000365092 109 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 AL590004.2-201ENST00000404787 371 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 RNU6-847P-201ENST00000411115 108 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 CR769767.1-201ENST00000436337 346 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 RPS27P22-201ENST00000478056 241 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 AL137100.2-201ENST00000555786 315 ntBASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.76□□□□□ -1.97
LRRTM3Q86VH5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.124-201ENST00000363339 93 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP493-201ENST00000364115 91 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 SNORA67.4-201ENST00000384688 142 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNU6-855P-201ENST00000410395 104 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 HSPE1P13-201ENST00000451143 297 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RPS26P55-201ENST00000471178 356 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RNU6-1041P-201ENST00000516254 102 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 AC009127.3-201ENST00000570531 403 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 AC005357.1-201ENST00000588399 301 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 AL162424.1-201ENST00000602325 221 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 AL353149.1-201ENST00000610667 244 ntBASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LRRTM3Q86VH5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 RNU1-58P-201ENST00000362413 163 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.552-201ENST00000384665 112 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 RNU6-388P-201ENST00000517012 105 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 RNU6-389P-201ENST00000517048 105 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 AC010297.1-201ENST00000623948 149 ntBASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM3Q86VH5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 RNU6-740P-201ENST00000364734 105 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.341-201ENST00000365341 102 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.368-201ENST00000365547 113 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.456-201ENST00000384232 111 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 AL513328.1-201ENST00000446460 224 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP320-201ENST00000516263 124 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 MIR4438-201ENST00000585271 93 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.65-201ENST00000362846 100 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 RNU6-662P-201ENST00000384253 104 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.590-201ENST00000410140 107 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 RNA5SP270-201ENST00000411361 118 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 AC010409.1-201ENST00000487382 476 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 Y_RNA.679-201ENST00000516416 91 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 RNU6-111P-201ENST00000517179 105 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 RNU1-104P-201ENST00000517280 175 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 MIR3169-201ENST00000578032 83 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 AC141273.2-201ENST00000618989 130 ntBASIC2.72□□□□□ -1.97
LRRTM3Q86VH5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.71□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms