Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC117454.1-201ENST00000491120 168 ntBASIC3□□□□□ -1.93
E4F1Q66K89 AC010598.1-201ENST00000510378 103 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU6-346P-201ENST00000516288 111 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RNU6-406P-201ENST00000516470 107 ntBASIC3□□□□□ -1.93
E4F1Q66K89 RN7SKP282-201ENST00000516824 299 ntBASIC3□□□□□ -1.93
E4F1Q66K89 AL355297.2-201ENST00000604792 129 ntBASIC3□□□□□ -1.93
E4F1Q66K89 Y_RNA.802-201ENST00000614892 130 ntBASIC3□□□□□ -1.93
E4F1Q66K89 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3□□□□□ -1.93
E4F1Q66K89 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3□□□□□ -1.93
E4F1Q66K89 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
E4F1Q66K89 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
E4F1Q66K89 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.99□□□□□ -1.93
E4F1Q66K89 AC096644.4-201ENST00000563417 2912 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 MIR26A1-201ENST00000362205 77 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 SNORD116-13-201ENST00000384408 92 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 RNU6-1235P-201ENST00000384559 107 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 SNORA19-201ENST00000384737 128 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 MIR34B-201ENST00000385076 84 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 MIR1289-1-201ENST00000408836 144 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 RNU6-498P-201ENST00000459468 107 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 RNU6-991P-201ENST00000516168 107 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 SNORA74D-201ENST00000516404 141 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.99□□□□□ -1.93
E4F1Q66K89 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 U2.22-201ENST00000636441 106 ntBASIC2.99□□□□□ -1.93
E4F1Q66K89 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
E4F1Q66K89 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
E4F1Q66K89 AL157777.2-201ENST00000258070 137 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 AL356292.1-201ENST00000283110 373 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 Y_RNA.121-201ENST00000363309 113 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 SNORA38.1-201ENST00000364172 131 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 snoU2_19.4-201ENST00000364329 80 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 MIR626-201ENST00000385032 94 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 RPS26P55-201ENST00000471178 356 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.98□□□□□ -1.93
E4F1Q66K89 RNA5SP20-201ENST00000515976 84 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 RN7SKP164-201ENST00000516138 266 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 AC025647.1-201ENST00000517879 253 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
E4F1Q66K89 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.97□□□□□ -1.93
E4F1Q66K89 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
E4F1Q66K89 MIR422A-201ENST00000362286 90 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SNORD114-7-201ENST00000362520 77 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 Y_RNA.272-201ENST00000364696 102 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 U8.7-201ENST00000364940 136 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 Y_RNA.357-201ENST00000365487 109 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RNU6-969P-201ENST00000383900 105 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SNORD116-18-201ENST00000383961 92 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RNU6-220P-201ENST00000390919 107 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 AC008134.1-201ENST00000420943 193 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SEPT7P4-201ENST00000437076 306 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RPL23AP58-201ENST00000440453 469 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 HSPE1P13-201ENST00000451143 297 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 AC010531.2-201ENST00000465012 153 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SCGB1D5P-201ENST00000515134 247 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RNU7-200P-201ENST00000516105 62 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RNU6-1007P-201ENST00000516586 107 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 RNU6-63P-201ENST00000516690 95 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SNORA48.11-201ENST00000517015 89 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 SNORA31.26-201ENST00000517250 137 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.97□□□□□ -1.93
E4F1Q66K89 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.97□□□□□ -1.93
E4F1Q66K89 MIR3910-1-201ENST00000580936 111 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 AC108706.1-201ENST00000611053 297 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.97□□□□□ -1.93
E4F1Q66K89 MIR548AY-201ENST00000617669 107 ntBASIC2.97□□□□□ -1.93
E4F1Q66K89 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.97□□□□□ -1.93
E4F1Q66K89 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
E4F1Q66K89 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
E4F1Q66K89 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
E4F1Q66K89 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
E4F1Q66K89 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
E4F1Q66K89 MIR367-201ENST00000362299 68 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 Y_RNA.75-201ENST00000362927 97 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 RNU6-312P-201ENST00000364629 107 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 RNU6-1240P-201ENST00000365155 104 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 Y_RNA.441-201ENST00000384123 112 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 MIR95-201ENST00000385072 81 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 AL137159.1-201ENST00000452808 512 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.96□□□□□ -1.94
E4F1Q66K89 RPS27P22-201ENST00000478056 241 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 RPL21P129-201ENST00000491732 478 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.96□□□□□ -1.94
E4F1Q66K89 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.96□□□□□ -1.94
E4F1Q66K89 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.96□□□□□ -1.94
E4F1Q66K89 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.96□□□□□ -1.94
E4F1Q66K89 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.96□□□□□ -1.94
E4F1Q66K89 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
E4F1Q66K89 AC079600.2-201ENST00000550076 130 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.96□□□□□ -1.94
E4F1Q66K89 MIR4744-201ENST00000581563 82 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
E4F1Q66K89 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
E4F1Q66K89 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.96□□□□□ -1.94
E4F1Q66K89 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 278.2 ms