Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-690P-201ENST00000365242 106 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 SNORD77.3-201ENST00000391113 65 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 RNU6-938P-201ENST00000411285 103 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 HMGN2P21-201ENST00000447764 270 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 RPS3P1-201ENST00000456781 192 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 U3.44-201ENST00000458938 192 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AC006445.1-201ENST00000491925 405 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 IGKV2-26-201ENST00000518305 343 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AC109329.2-201ENST00000519658 482 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 MIR3163-201ENST00000581592 73 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AC021443.1-201ENST00000604478 211 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AC012531.4-201ENST00000616509 177 ntBASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RSPO4Q2I0M5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 FAM35CP-201ENST00000554755 2470 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 RNU6-170P-201ENST00000362832 104 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 SNORA33-201ENST00000363664 130 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 SNORD24-201ENST00000383884 75 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 RNA5SP208-201ENST00000516156 78 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 RNU6-795P-201ENST00000516323 103 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 LINC00901.1-201ENST00000617252 152 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 Z83843.1-201ENST00000604070 3685 ntBASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RSPO4Q2I0M5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RNU1-72P-201ENST00000362976 153 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RNU6-944P-201ENST00000364023 107 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RNU6-418P-201ENST00000384035 107 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1104P-201ENST00000384723 104 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 MIR493-201ENST00000385254 89 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 MIR889-201ENST00000401280 79 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 AL133475.1-201ENST00000404414 305 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 BTF3P4-201ENST00000418852 495 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RNU7-57P-201ENST00000459540 60 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 AP000873.1-201ENST00000463987 400 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RPS15AP11-201ENST00000594193 385 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RPL17P51-201ENST00000605218 238 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 JPX_2.1-201ENST00000614161 69 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 U6.73-201ENST00000619194 103 ntBASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RSPO4Q2I0M5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 AC006504.1-201ENST00000562493 3666 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 RNU6-349P-201ENST00000362402 107 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 RNU6-1010P-201ENST00000362757 107 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 Y_RNA.190-201ENST00000363964 101 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 SNORA7.2-201ENST00000364446 145 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 SNORD115-35-201ENST00000365122 82 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 SNORD14D-201ENST00000384390 87 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 RNA5SP239-201ENST00000410218 129 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 RPS4XP11-201ENST00000446897 772 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 AC078918.1-201ENST00000498515 228 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 AL360157.1-201ENST00000565962 87 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 MIR3162-201ENST00000581818 82 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 MIR4435-1-201ENST00000582552 80 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 MIR5197-201ENST00000583721 112 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 MIR376A2-201ENST00000636782 80 ntBASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.41□□□□□ -1.86
RSPO4Q2I0M5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RSPO4Q2I0M5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RSPO4Q2I0M5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.4□□□□□ -1.86
RSPO4Q2I0M5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.4□□□□□ -1.86
RSPO4Q2I0M5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RSPO4Q2I0M5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 RNA5SP167-201ENST00000365461 116 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 RNU6-652P-201ENST00000365488 107 ntBASIC3.4□□□□□ -1.87
RSPO4Q2I0M5 RNY1P6-201ENST00000384193 109 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms