Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RAE1P78406 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RAE1P78406 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RAE1P78406 UBE2WP1-201ENST00000362030 340 ntBASIC2.25□□□□□ -2.05
RAE1P78406 RNU6-271P-201ENST00000363858 105 ntBASIC2.25□□□□□ -2.05
RAE1P78406 SNORA20.1-201ENST00000364790 130 ntBASIC2.25□□□□□ -2.05
RAE1P78406 RNU6-1240P-201ENST00000365155 104 ntBASIC2.25□□□□□ -2.05
RAE1P78406 SNORA20B-201ENST00000384220 132 ntBASIC2.25□□□□□ -2.05
RAE1P78406 RNU6-710P-201ENST00000410424 105 ntBASIC2.25□□□□□ -2.05
RAE1P78406 AL353689.1-201ENST00000438895 199 ntBASIC2.25□□□□□ -2.05
RAE1P78406 RNA5SP402-201ENST00000517148 110 ntBASIC2.25□□□□□ -2.05
RAE1P78406 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.25□□□□□ -2.05
RAE1P78406 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
RAE1P78406 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RAE1P78406 SNORA27.1-201ENST00000362604 124 ntBASIC2.24□□□□□ -2.05
RAE1P78406 Y_RNA.275-201ENST00000364726 110 ntBASIC2.24□□□□□ -2.05
RAE1P78406 SNORD58.1-201ENST00000391313 66 ntBASIC2.24□□□□□ -2.05
RAE1P78406 RNU6-847P-201ENST00000411115 108 ntBASIC2.24□□□□□ -2.05
RAE1P78406 SUMO1P4-201ENST00000429430 302 ntBASIC2.24□□□□□ -2.05
RAE1P78406 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.24□□□□□ -2.05
RAE1P78406 AL121890.1-201ENST00000435457 205 ntBASIC2.24□□□□□ -2.05
RAE1P78406 RPL23AP7-203ENST00000449021 469 ntBASIC2.24□□□□□ -2.05
RAE1P78406 Y_RNA.673-201ENST00000516306 88 ntBASIC2.24□□□□□ -2.05
RAE1P78406 RNA5SP137-201ENST00000516833 135 ntBASIC2.24□□□□□ -2.05
RAE1P78406 RPL21P9-201ENST00000556149 474 ntBASIC2.24□□□□□ -2.05
RAE1P78406 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.24□□□□□ -2.05
RAE1P78406 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
RAE1P78406 AL512605.2-201ENST00000592972 256 ntBASIC2.24□□□□□ -2.05
RAE1P78406 AC010900.2-201ENST00000604508 210 ntBASIC2.24□□□□□ -2.05
RAE1P78406 BX284668.6-201ENST00000606899 438 ntBASIC2.24□□□□□ -2.05
RAE1P78406 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
RAE1P78406 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
RAE1P78406 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.24□□□□□ -2.05
RAE1P78406 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAE1P78406 Y_RNA.124-201ENST00000363339 93 ntBASIC2.23□□□□□ -2.05
RAE1P78406 SNORD27-201ENST00000363981 72 ntBASIC2.23□□□□□ -2.05
RAE1P78406 RNU1-91P-201ENST00000364746 163 ntBASIC2.23□□□□□ -2.05
RAE1P78406 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
RAE1P78406 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.23□□□□□ -2.05
RAE1P78406 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.23□□□□□ -2.05
RAE1P78406 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
RAE1P78406 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.23□□□□□ -2.05
RAE1P78406 CR769767.1-201ENST00000436337 346 ntBASIC2.23□□□□□ -2.05
RAE1P78406 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
RAE1P78406 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.23□□□□□ -2.05
RAE1P78406 SNORA27.4-201ENST00000516650 95 ntBASIC2.23□□□□□ -2.05
RAE1P78406 RPL12P50-201ENST00000603116 116 ntBASIC2.23□□□□□ -2.05
RAE1P78406 AL353149.1-201ENST00000610667 244 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.15-201ENST00000611544 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.16-201ENST00000613119 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.12-201ENST00000613778 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.20-201ENST00000613956 192 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.9-201ENST00000615427 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.11-201ENST00000616345 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.2-201ENST00000616535 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.3-201ENST00000617785 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.19-201ENST00000618602 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 RNU2-1-201ENST00000618664 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.6-201ENST00000619225 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.5-201ENST00000619465 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 U2.10-201ENST00000620268 191 ntBASIC2.23□□□□□ -2.05
RAE1P78406 Y_RNA.54-201ENST00000362766 105 ntBASIC2.22□□□□□ -2.05
RAE1P78406 Y_RNA.539-201ENST00000384635 107 ntBASIC2.22□□□□□ -2.05
RAE1P78406 NDUFB4P4-201ENST00000404822 243 ntBASIC2.22□□□□□ -2.05
RAE1P78406 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC007064.1-201ENST00000412238 351 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC060773.1-201ENST00000421698 310 ntBASIC2.22□□□□□ -2.05
RAE1P78406 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
RAE1P78406 RPS26P55-201ENST00000471178 356 ntBASIC2.22□□□□□ -2.05
RAE1P78406 RN7SL636P-201ENST00000497504 294 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC234781.5-201ENST00000508429 271 ntBASIC2.22□□□□□ -2.05
RAE1P78406 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.22□□□□□ -2.05
RAE1P78406 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
RAE1P78406 SUMO2P18-201ENST00000518873 252 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
RAE1P78406 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
RAE1P78406 AC005357.1-201ENST00000588399 301 ntBASIC2.22□□□□□ -2.05
RAE1P78406 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
RAE1P78406 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RAE1P78406 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RAE1P78406 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.22□□□□□ -2.05
RAE1P78406 snoU2-30.2-201ENST00000362805 70 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
RAE1P78406 Y_RNA.217-201ENST00000364214 105 ntBASIC2.21□□□□□ -2.06
RAE1P78406 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
RAE1P78406 Y_RNA.277-201ENST00000364754 102 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU1-138P-201ENST00000384093 164 ntBASIC2.21□□□□□ -2.06
RAE1P78406 Y_RNA.552-201ENST00000384665 112 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.21□□□□□ -2.06
RAE1P78406 HSPE1P13-201ENST00000451143 297 ntBASIC2.21□□□□□ -2.06
RAE1P78406 Y_RNA.641-201ENST00000459414 105 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AL049873.1-201ENST00000480540 376 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AC011406.1-201ENST00000512440 370 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6-1146P-201ENST00000516282 102 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6-388P-201ENST00000517012 105 ntBASIC2.21□□□□□ -2.06
RAE1P78406 RNU6-389P-201ENST00000517048 105 ntBASIC2.21□□□□□ -2.06
RAE1P78406 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms