Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HERVK_113P62684 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
HERVK_113P62684 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.96□□□□□ -1.94
HERVK_113P62684 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
HERVK_113P62684 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HERVK_113P62684 RNU6-763P-201ENST00000390865 106 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RNU6-918P-201ENST00000391219 106 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 MIR300-201ENST00000401138 83 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RNU6-855P-201ENST00000410395 104 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RN7SKP51-201ENST00000410781 304 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RNU4-53P-201ENST00000410828 140 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 Z98742.3-201ENST00000418637 326 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113P62684 U8.19-201ENST00000459095 133 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 snoU13.26-201ENST00000459452 105 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RNU7-57P-201ENST00000459540 60 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 UBL5P3-201ENST00000475112 231 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 RPS27AP9-201ENST00000477681 438 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113P62684 AC074198.2-201ENST00000508153 258 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 ATP5EP1-201ENST00000510257 156 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 HMGB3P3-201ENST00000510526 400 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.95□□□□□ -1.94
HERVK_113P62684 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
HERVK_113P62684 AC010329.5-201ENST00000623497 2174 ntBASIC2.95□□□□□ -1.94
HERVK_113P62684 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
HERVK_113P62684 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HERVK_113P62684 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.94□□□□□ -1.94
HERVK_113P62684 SNORA68.1-201ENST00000364537 132 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 Y_RNA.304-201ENST00000365011 112 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 FO393413.1-201ENST00000402892 195 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 MIR1185-2-201ENST00000408687 86 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 RNU6-710P-201ENST00000410424 105 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 MICF-203ENST00000432679 129 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 AC114982.1-201ENST00000469402 321 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
HERVK_113P62684 RN7SKP40-201ENST00000517211 242 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 SNORA31.26-201ENST00000517250 137 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.94□□□□□ -1.94
HERVK_113P62684 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.94□□□□□ -1.94
HERVK_113P62684 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.94□□□□□ -1.94
HERVK_113P62684 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 MIR5739-201ENST00000619803 80 ntBASIC2.94□□□□□ -1.94
HERVK_113P62684 Y_RNA.233-201ENST00000364407 101 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 RNU6-438P-201ENST00000365561 103 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 U8.9-201ENST00000365667 134 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 RN7SKP192-201ENST00000411291 327 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 AC104332.2-201ENST00000429959 156 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 AC016717.1-201ENST00000448918 286 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 Y_RNA.637-201ENST00000459424 114 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 RPS29P21-201ENST00000496272 170 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 AC023141.11-201ENST00000508864 202 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 Y_RNA.662-201ENST00000516028 97 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HERVK_113P62684 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.93□□□□□ -1.94
HERVK_113P62684 MIR7843-201ENST00000622274 79 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HERVK_113P62684 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.93□□□□□ -1.94
HERVK_113P62684 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HERVK_113P62684 AC134026.1-201ENST00000623249 2239 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 RNU6-774P-201ENST00000363238 107 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 RNU6-743P-201ENST00000364151 106 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HERVK_113P62684 SNORA40.19-201ENST00000390846 128 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 MTCO2P33-201ENST00000402100 465 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 RNU6-57P-201ENST00000411348 103 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.92□□□□□ -1.94
HERVK_113P62684 AL135790.2-201ENST00000437701 267 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.92□□□□□ -1.94
HERVK_113P62684 snoU13.15-201ENST00000459407 104 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.92□□□□□ -1.94
HERVK_113P62684 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HERVK_113P62684 MIR4308-201ENST00000580634 81 ntBASIC2.92□□□□□ -1.94
HERVK_113P62684 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HERVK_113P62684 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HERVK_113P62684 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
HERVK_113P62684 RNU6-653P-201ENST00000363074 106 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 RNU6-1048P-201ENST00000364054 107 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 RNU6-801P-201ENST00000364087 105 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 SNORD114-30-201ENST00000364448 72 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 Y_RNA.287-201ENST00000364853 94 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 SNORD31B-201ENST00000364977 69 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 Y_RNA.341-201ENST00000365341 102 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 RNU6-546P-201ENST00000383991 107 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 SNORA26.7-201ENST00000391288 122 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 AL357139.1-201ENST00000407792 426 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 RNU2-32P-201ENST00000411193 191 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 SNORA70.12-201ENST00000516084 153 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
HERVK_113P62684 AC136628.3-201ENST00000521868 290 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 AC027419.1-201ENST00000522976 328 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.91□□□□□ -1.94
HERVK_113P62684 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms