Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CYCSP23-201ENST00000519781 313 ntBASIC2.16□□□□□ -2.06
HDAC4P56524 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
HDAC4P56524 RPS29P30-201ENST00000600975 111 ntBASIC2.16□□□□□ -2.06
HDAC4P56524 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
HDAC4P56524 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 Y_RNA.26-201ENST00000362539 101 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 SNORD114-6-201ENST00000364393 72 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU6-1164P-201ENST00000364428 107 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU6-975P-201ENST00000384296 105 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 MIR548F4-201ENST00000408515 105 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 ELOCP20-201ENST00000422460 345 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RAB28P5-201ENST00000427490 651 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 NDUFB4P10-201ENST00000452541 359 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 MTATP8P1-201ENST00000467115 207 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU6-397P-201ENST00000516226 104 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU2-34P-201ENST00000516534 121 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 AC131281.1-201ENST00000522984 164 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.15□□□□□ -2.07
HDAC4P56524 AC136932.1-201ENST00000574771 208 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 AC008737.2-201ENST00000599446 118 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
HDAC4P56524 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HDAC4P56524 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
HDAC4P56524 LINC02555-201ENST00000563933 1951 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 MIR410-201ENST00000362222 80 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 U3.8-201ENST00000363675 217 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 Y_RNA.214-201ENST00000364201 112 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-454P-201ENST00000364292 107 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-806P-201ENST00000365147 105 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 Y_RNA.380-201ENST00000365663 111 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 Y_RNA.526-201ENST00000384572 110 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNA5SP465-201ENST00000391195 109 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RPL21P1-201ENST00000399532 476 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-121P-201ENST00000410525 99 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AC139712.2-201ENST00000424302 339 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AL357134.1-201ENST00000445848 426 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RPL23AP7-203ENST00000449021 469 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-625P-201ENST00000459412 107 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 RNU6-897P-201ENST00000517135 105 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 MIR4423-201ENST00000580922 80 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.14□□□□□ -2.07
HDAC4P56524 AC136443.5-201ENST00000603741 370 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AL355297.3-201ENST00000604082 446 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 AC130454.1-201ENST00000622948 401 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
HDAC4P56524 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
HDAC4P56524 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.14□□□□□ -2.07
HDAC4P56524 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HDAC4P56524 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 SNORA63.7-201ENST00000365579 123 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.13□□□□□ -2.07
HDAC4P56524 RNU6-20P-201ENST00000384106 107 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNU6-1235P-201ENST00000384559 107 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AL512604.1-201ENST00000404812 257 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNU2-2P-201ENST00000410396 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC016909.1-201ENST00000415916 166 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.13□□□□□ -2.07
HDAC4P56524 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AL358176.2-201ENST00000425769 204 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC005002.2-201ENST00000438228 269 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC073910.1-201ENST00000445047 438 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNU6-498P-201ENST00000459468 107 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC025033.1-201ENST00000463883 194 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.13□□□□□ -2.07
HDAC4P56524 U2.15-201ENST00000611544 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.16-201ENST00000613119 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.12-201ENST00000613778 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.20-201ENST00000613956 192 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.9-201ENST00000615427 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.11-201ENST00000616345 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.2-201ENST00000616535 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.3-201ENST00000617785 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.19-201ENST00000618602 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 RNU2-1-201ENST00000618664 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.6-201ENST00000619225 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.5-201ENST00000619465 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 U2.10-201ENST00000620268 191 ntBASIC2.13□□□□□ -2.07
HDAC4P56524 Y_RNA.101-201ENST00000363154 102 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RNU6-626P-201ENST00000363354 107 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 Y_RNA.210-201ENST00000364161 110 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 RNU6-1264P-201ENST00000383891 107 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 MIR1287-201ENST00000408492 90 ntBASIC2.12□□□□□ -2.07
HDAC4P56524 MIR1185-2-201ENST00000408687 86 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms