Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
VCPP55072 RNU6-331P-201ENST00000384724 107 ntBASIC1.49□□□□□ -2.17
VCPP55072 MIR548B-201ENST00000385247 97 ntBASIC1.49□□□□□ -2.17
VCPP55072 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
VCPP55072 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VCPP55072 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
VCPP55072 COX6CP14-201ENST00000469580 174 ntBASIC1.49□□□□□ -2.17
VCPP55072 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.49□□□□□ -2.17
VCPP55072 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.49□□□□□ -2.17
VCPP55072 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
VCPP55072 AL121579.1-201ENST00000555129 305 ntBASIC1.49□□□□□ -2.17
VCPP55072 MIR5695-201ENST00000579717 85 ntBASIC1.49□□□□□ -2.17
VCPP55072 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.49□□□□□ -2.17
VCPP55072 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
VCPP55072 MIR338-201ENST00000636369 67 ntBASIC1.49□□□□□ -2.17
VCPP55072 AC099654.14-201ENST00000638599 341 ntBASIC1.49□□□□□ -2.17
VCPP55072 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
VCPP55072 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VCPP55072 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VCPP55072 RNU6-222P-201ENST00000362438 107 ntBASIC1.48□□□□□ -2.17
VCPP55072 U3.8-201ENST00000363675 217 ntBASIC1.48□□□□□ -2.17
VCPP55072 RNU6-1019P-201ENST00000364424 107 ntBASIC1.48□□□□□ -2.17
VCPP55072 Y_RNA.415-201ENST00000384012 112 ntBASIC1.48□□□□□ -2.17
VCPP55072 RNU6-700P-201ENST00000391043 107 ntBASIC1.48□□□□□ -2.17
VCPP55072 SNORA75.4-201ENST00000391278 119 ntBASIC1.48□□□□□ -2.17
VCPP55072 RNU1-139P-201ENST00000391307 165 ntBASIC1.48□□□□□ -2.17
VCPP55072 MIR190B-201ENST00000401119 79 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC138393.2-201ENST00000414742 246 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
VCPP55072 CST2P1-201ENST00000425770 87 ntBASIC1.48□□□□□ -2.17
VCPP55072 SDAD1P3-201ENST00000427380 333 ntBASIC1.48□□□□□ -2.17
VCPP55072 USP9YP16-201ENST00000430287 407 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC245047.4-201ENST00000433189 144 ntBASIC1.48□□□□□ -2.17
VCPP55072 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
VCPP55072 NDUFB4P10-201ENST00000452541 359 ntBASIC1.48□□□□□ -2.17
VCPP55072 USP9YP23-201ENST00000455085 407 ntBASIC1.48□□□□□ -2.17
VCPP55072 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.48□□□□□ -2.17
VCPP55072 RNU6-221P-201ENST00000459541 99 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC093303.1-201ENST00000514549 295 ntBASIC1.48□□□□□ -2.17
VCPP55072 RNU6-1114P-201ENST00000516022 107 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC105029.1-201ENST00000520250 669 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
VCPP55072 AK6P2-201ENST00000549020 471 ntBASIC1.48□□□□□ -2.17
VCPP55072 AL160236.1-201ENST00000556317 195 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC010999.1-201ENST00000611856 324 ntBASIC1.48□□□□□ -2.17
VCPP55072 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
VCPP55072 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.48□□□□□ -2.17
VCPP55072 TPTEP1-208ENST00000636884 213 ntBASIC1.48□□□□□ -2.17
VCPP55072 AC010615.1-201ENST00000594254 1764 ntBASIC1.48□□□□□ -2.17
VCPP55072 MTND5P16-201ENST00000460269 1703 ntBASIC1.47□□□□□ -2.17
VCPP55072 snoU2-30.2-201ENST00000362805 70 ntBASIC1.47□□□□□ -2.17
VCPP55072 RNU6-414P-201ENST00000363705 104 ntBASIC1.47□□□□□ -2.17
VCPP55072 RNU6-281P-201ENST00000384212 103 ntBASIC1.47□□□□□ -2.17
VCPP55072 MIR520A-201ENST00000384862 85 ntBASIC1.47□□□□□ -2.17
VCPP55072 RNU4-14P-201ENST00000410858 122 ntBASIC1.47□□□□□ -2.17
VCPP55072 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.47□□□□□ -2.17
VCPP55072 MTCYBP10-201ENST00000424905 650 ntBASIC1.47□□□□□ -2.17
VCPP55072 AL353997.1-201ENST00000432936 108 ntBASIC1.47□□□□□ -2.17
VCPP55072 HMGN2P34-201ENST00000437647 269 ntBASIC1.47□□□□□ -2.17
VCPP55072 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.47□□□□□ -2.17
VCPP55072 MTND4P17-201ENST00000470444 350 ntBASIC1.47□□□□□ -2.17
VCPP55072 HMGN1P13-201ENST00000505795 138 ntBASIC1.47□□□□□ -2.17
VCPP55072 RNU6-1146P-201ENST00000516282 102 ntBASIC1.47□□□□□ -2.17
VCPP55072 SNORA20.3-201ENST00000516880 132 ntBASIC1.47□□□□□ -2.17
VCPP55072 AC025647.1-201ENST00000517879 253 ntBASIC1.47□□□□□ -2.17
VCPP55072 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VCPP55072 AC005899.2-201ENST00000584353 90 ntBASIC1.47□□□□□ -2.17
VCPP55072 MZT1P2-201ENST00000604387 248 ntBASIC1.47□□□□□ -2.17
VCPP55072 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VCPP55072 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VCPP55072 U8.1-201ENST00000362843 134 ntBASIC1.46□□□□□ -2.18
VCPP55072 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
VCPP55072 RNU6-1283P-201ENST00000365314 105 ntBASIC1.46□□□□□ -2.18
VCPP55072 Y_RNA.390-201ENST00000383932 102 ntBASIC1.46□□□□□ -2.18
VCPP55072 MIR1253-201ENST00000408273 105 ntBASIC1.46□□□□□ -2.18
VCPP55072 MIR1185-2-201ENST00000408687 86 ntBASIC1.46□□□□□ -2.18
VCPP55072 MIR1267-201ENST00000408723 78 ntBASIC1.46□□□□□ -2.18
VCPP55072 AC016909.1-201ENST00000415916 166 ntBASIC1.46□□□□□ -2.18
VCPP55072 AC008134.1-201ENST00000420943 193 ntBASIC1.46□□□□□ -2.18
VCPP55072 AC005534.2-201ENST00000431047 433 ntBASIC1.46□□□□□ -2.18
VCPP55072 AC098614.3-201ENST00000438957 440 ntBASIC1.46□□□□□ -2.18
VCPP55072 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.46□□□□□ -2.18
VCPP55072 Y_RNA.635-201ENST00000459041 101 ntBASIC1.46□□□□□ -2.18
VCPP55072 HMGN1P12-201ENST00000499125 195 ntBASIC1.46□□□□□ -2.18
VCPP55072 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.46□□□□□ -2.18
VCPP55072 SCARNA16.2-201ENST00000516520 172 ntBASIC1.46□□□□□ -2.18
VCPP55072 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.46□□□□□ -2.18
VCPP55072 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.46□□□□□ -2.18
VCPP55072 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.46□□□□□ -2.18
VCPP55072 MIR6767-201ENST00000637302 66 ntBASIC1.46□□□□□ -2.18
VCPP55072 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VCPP55072 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
VCPP55072 Y_RNA.287-201ENST00000364853 94 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU6-1240P-201ENST00000365155 104 ntBASIC1.45□□□□□ -2.18
VCPP55072 Y_RNA.364-201ENST00000365532 101 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU6-417P-201ENST00000384712 107 ntBASIC1.45□□□□□ -2.18
VCPP55072 RNU2-7P-201ENST00000410794 178 ntBASIC1.45□□□□□ -2.18
VCPP55072 RPL30P13-201ENST00000418873 348 ntBASIC1.45□□□□□ -2.18
VCPP55072 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.45□□□□□ -2.18
VCPP55072 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms