Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP002001.1-203ENST00000534002 267 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 AL161670.1-201ENST00000554348 137 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 MIR4753-201ENST00000585119 83 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 MIR4781-201ENST00000585250 76 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 SNORD11B-201ENST00000607707 90 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 AC091925.1-201ENST00000623204 462 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 AC068205.3-201ENST00000636385 468 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.57□□□□□ -2.16
BRCC3P46736 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
BRCC3P46736 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
BRCC3P46736 AL159152.1-201ENST00000635019 2587 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RNU6-490P-201ENST00000362985 107 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 Y_RNA.80-201ENST00000362996 102 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RNU6-280P-201ENST00000364145 104 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RNU6-879P-201ENST00000364328 108 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 Y_RNA.485-201ENST00000384395 102 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 AL117342.1-201ENST00000404861 406 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 Y_RNA.592-201ENST00000410274 109 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RNU6-57P-201ENST00000411348 103 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RNU6-856P-201ENST00000516959 98 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.56□□□□□ -2.16
BRCC3P46736 AC080078.3-201ENST00000605407 463 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 AL078596.1-201ENST00000624856 447 ntBASIC1.56□□□□□ -2.16
BRCC3P46736 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.56□□□□□ -2.16
BRCC3P46736 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
BRCC3P46736 AC073544.1-201ENST00000600110 1595 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
BRCC3P46736 MTND5P10-201ENST00000603719 1809 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 MIR126-201ENST00000362291 85 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 RNU6-1301P-201ENST00000362724 104 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 RNU6-862P-201ENST00000362804 105 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 Y_RNA.61-201ENST00000362835 102 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 Y_RNA.146-201ENST00000363549 102 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 SNORA33-201ENST00000363664 130 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 Y_RNA.314-201ENST00000365114 102 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 MIR1185-2-201ENST00000408687 86 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 AC004965.1-201ENST00000413033 213 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.55□□□□□ -2.16
BRCC3P46736 TRMT112P2-201ENST00000512910 132 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 AC083806.3-201ENST00000614016 455 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
BRCC3P46736 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.55□□□□□ -2.16
BRCC3P46736 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
BRCC3P46736 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
BRCC3P46736 MIR369-201ENST00000362155 70 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 Y_RNA.31-201ENST00000362574 102 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 SNORA7.1-201ENST00000363750 139 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 Y_RNA.813-201ENST00000364639 102 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 MIR320B2-201ENST00000408479 138 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC114482.1-201ENST00000418010 247 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC236972.2-201ENST00000434979 310 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.54□□□□□ -2.16
BRCC3P46736 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC011406.1-201ENST00000512440 370 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 RNU6-948P-201ENST00000516374 107 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 Y_RNA.683-201ENST00000516508 93 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC025647.1-201ENST00000517879 253 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.54□□□□□ -2.16
BRCC3P46736 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
BRCC3P46736 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AL080274.1-201ENST00000605565 220 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AC006001.4-201ENST00000622243 395 ntBASIC1.54□□□□□ -2.16
BRCC3P46736 AL391987.6-201ENST00000305671 199 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 Y_RNA.197-201ENST00000364004 102 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 Y_RNA.287-201ENST00000364853 94 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 RNU6-1235P-201ENST00000384559 107 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 MIR625-201ENST00000385047 85 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 SNORA69.1-201ENST00000390904 137 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 RNU6-308P-201ENST00000390957 107 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
BRCC3P46736 MTND4P28-201ENST00000426217 387 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 RNU6-498P-201ENST00000459468 107 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 RNU6-221P-201ENST00000459541 99 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 Y_RNA.661-201ENST00000516003 99 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 RNU4-77P-201ENST00000516692 156 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 SUMO2P18-201ENST00000518873 252 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 AC055872.1-201ENST00000570978 278 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 SNORD58B-201ENST00000607313 66 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 AL353149.1-201ENST00000610667 244 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 uc_338.22-201ENST00000622722 187 ntBASIC1.53□□□□□ -2.16
BRCC3P46736 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.17
BRCC3P46736 RNU6-961P-201ENST00000363893 105 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 SNORD42.2-201ENST00000365570 69 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 RNU6-474P-201ENST00000384243 107 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 Y_RNA.535-201ENST00000384612 99 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 SNORD12B-201ENST00000410433 91 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 AC018865.2-201ENST00000423631 129 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
BRCC3P46736 HMGN2P34-201ENST00000437647 269 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 SNRPGP13-201ENST00000442212 177 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 AC008834.1-201ENST00000511612 175 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 RN7SKP49-201ENST00000516675 260 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms