Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
NID1P14543 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 RNU6-414P-201ENST00000363705 104 ntBASIC3.42□□□□□ -1.86
NID1P14543 Y_RNA.219-201ENST00000364232 113 ntBASIC3.42□□□□□ -1.86
NID1P14543 RNU6-418P-201ENST00000384035 107 ntBASIC3.42□□□□□ -1.86
NID1P14543 RNU6-1152P-201ENST00000384576 107 ntBASIC3.42□□□□□ -1.86
NID1P14543 SNORD78.1-201ENST00000390866 65 ntBASIC3.42□□□□□ -1.86
NID1P14543 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
NID1P14543 RN7SKP156-201ENST00000410308 342 ntBASIC3.42□□□□□ -1.86
NID1P14543 SNORA19.1-201ENST00000410656 129 ntBASIC3.42□□□□□ -1.86
NID1P14543 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.42□□□□□ -1.86
NID1P14543 AL133162.1-201ENST00000463228 453 ntBASIC3.42□□□□□ -1.86
NID1P14543 RNU6-240P-201ENST00000516098 97 ntBASIC3.42□□□□□ -1.86
NID1P14543 SCARNA15-202ENST00000516881 127 ntBASIC3.42□□□□□ -1.86
NID1P14543 AC134878.1-201ENST00000619901 243 ntBASIC3.42□□□□□ -1.86
NID1P14543 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
NID1P14543 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NID1P14543 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
NID1P14543 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NID1P14543 RNA5SP119-201ENST00000362715 117 ntBASIC3.41□□□□□ -1.86
NID1P14543 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
NID1P14543 AL159169.1-201ENST00000421119 127 ntBASIC3.41□□□□□ -1.86
NID1P14543 HMGN2P16-201ENST00000456802 261 ntBASIC3.41□□□□□ -1.86
NID1P14543 RNU7-170P-201ENST00000459303 61 ntBASIC3.41□□□□□ -1.86
NID1P14543 NDUFA4P2-201ENST00000489989 244 ntBASIC3.41□□□□□ -1.86
NID1P14543 SNORA74D-201ENST00000516404 141 ntBASIC3.41□□□□□ -1.86
NID1P14543 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.41□□□□□ -1.86
NID1P14543 AC141557.1-201ENST00000540982 400 ntBASIC3.41□□□□□ -1.86
NID1P14543 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
NID1P14543 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
NID1P14543 AP000553.6-201ENST00000641242 118 ntBASIC3.41□□□□□ -1.86
NID1P14543 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.41□□□□□ -1.86
NID1P14543 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NID1P14543 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NID1P14543 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NID1P14543 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NID1P14543 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NID1P14543 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NID1P14543 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NID1P14543 MIR494-201ENST00000349529 81 ntBASIC3.4□□□□□ -1.87
NID1P14543 RNU6-1134P-201ENST00000365156 101 ntBASIC3.4□□□□□ -1.87
NID1P14543 SNORA9-201ENST00000384215 133 ntBASIC3.4□□□□□ -1.87
NID1P14543 SNORD77.3-201ENST00000391113 65 ntBASIC3.4□□□□□ -1.87
NID1P14543 Y_RNA.621-201ENST00000411065 96 ntBASIC3.4□□□□□ -1.87
NID1P14543 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
NID1P14543 AL513477.1-202ENST00000417061 214 ntBASIC3.4□□□□□ -1.87
NID1P14543 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
NID1P14543 Z98742.2-201ENST00000431564 187 ntBASIC3.4□□□□□ -1.87
NID1P14543 SNRPGP3-201ENST00000469405 227 ntBASIC3.4□□□□□ -1.87
NID1P14543 MRPS36P2-201ENST00000512569 299 ntBASIC3.4□□□□□ -1.87
NID1P14543 RNY4P20-201ENST00000516678 93 ntBASIC3.4□□□□□ -1.87
NID1P14543 SNORA70.24-201ENST00000517233 118 ntBASIC3.4□□□□□ -1.87
NID1P14543 AC025521.1-201ENST00000621624 286 ntBASIC3.4□□□□□ -1.87
NID1P14543 AC002546.1-201ENST00000588041 2504 ntBASIC3.4□□□□□ -1.87
NID1P14543 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NID1P14543 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NID1P14543 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.4□□□□□ -1.87
NID1P14543 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.87
NID1P14543 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NID1P14543 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
NID1P14543 RNU6-438P-201ENST00000365561 103 ntBASIC3.39□□□□□ -1.87
NID1P14543 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NID1P14543 HMGN2P31-201ENST00000432430 273 ntBASIC3.39□□□□□ -1.87
NID1P14543 RPS26P48-201ENST00000491713 339 ntBASIC3.39□□□□□ -1.87
NID1P14543 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.39□□□□□ -1.87
NID1P14543 RNU2-34P-201ENST00000516534 121 ntBASIC3.39□□□□□ -1.87
NID1P14543 RNU6-1096P-201ENST00000517089 102 ntBASIC3.39□□□□□ -1.87
NID1P14543 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.39□□□□□ -1.87
NID1P14543 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NID1P14543 AP003122.5-201ENST00000527668 3766 ntBASIC3.39□□□□□ -1.87
NID1P14543 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NID1P14543 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.38□□□□□ -1.87
NID1P14543 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
NID1P14543 MIR520G-201ENST00000385064 90 ntBASIC3.38□□□□□ -1.87
NID1P14543 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC107297.1-201ENST00000459991 176 ntBASIC3.38□□□□□ -1.87
NID1P14543 HMGN1P7-201ENST00000491722 313 ntBASIC3.38□□□□□ -1.87
NID1P14543 RNU6-693P-201ENST00000516134 107 ntBASIC3.38□□□□□ -1.87
NID1P14543 RNU6-904P-201ENST00000516206 101 ntBASIC3.38□□□□□ -1.87
NID1P14543 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
NID1P14543 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC026421.1-201ENST00000519101 163 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC008011.1-201ENST00000545989 227 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC084364.2-201ENST00000546924 395 ntBASIC3.38□□□□□ -1.87
NID1P14543 AC103810.1-201ENST00000579873 453 ntBASIC3.38□□□□□ -1.87
NID1P14543 AL590808.1-201ENST00000618696 141 ntBASIC3.38□□□□□ -1.87
NID1P14543 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
NID1P14543 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NID1P14543 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NID1P14543 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms