Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 U2.9-201ENST00000615427 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.11-201ENST00000616345 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.2-201ENST00000616535 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.3-201ENST00000617785 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.19-201ENST00000618602 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 RNU2-1-201ENST00000618664 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.6-201ENST00000619225 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.5-201ENST00000619465 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
PCNAP12004 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
PCNAP12004 MIR410-201ENST00000362222 80 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNU6-862P-201ENST00000362804 105 ntBASIC2.03□□□□□ -2.08
PCNAP12004 Y_RNA.162-201ENST00000363683 102 ntBASIC2.03□□□□□ -2.08
PCNAP12004 Y_RNA.214-201ENST00000364201 112 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNU6-1175P-201ENST00000365200 107 ntBASIC2.03□□□□□ -2.08
PCNAP12004 SNORA63.7-201ENST00000365579 123 ntBASIC2.03□□□□□ -2.08
PCNAP12004 Y_RNA.380-201ENST00000365663 111 ntBASIC2.03□□□□□ -2.08
PCNAP12004 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PCNAP12004 AL355796.1-201ENST00000406706 323 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
PCNAP12004 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.03□□□□□ -2.08
PCNAP12004 HMGN2P34-201ENST00000437647 269 ntBASIC2.03□□□□□ -2.08
PCNAP12004 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.03□□□□□ -2.08
PCNAP12004 ATP5J2P3-201ENST00000451550 258 ntBASIC2.03□□□□□ -2.08
PCNAP12004 SNORD65B-201ENST00000459126 73 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNU6-327P-201ENST00000516270 127 ntBASIC2.03□□□□□ -2.08
PCNAP12004 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
PCNAP12004 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
PCNAP12004 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
PCNAP12004 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
PCNAP12004 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
PCNAP12004 Y_RNA.287-201ENST00000364853 94 ntBASIC2.02□□□□□ -2.09
PCNAP12004 Y_RNA.512-201ENST00000384518 102 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNU6-417P-201ENST00000384712 107 ntBASIC2.02□□□□□ -2.09
PCNAP12004 Y_RNA.570-201ENST00000384750 101 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNU6-1199P-201ENST00000411249 104 ntBASIC2.02□□□□□ -2.09
PCNAP12004 AC099677.2-201ENST00000436385 175 ntBASIC2.02□□□□□ -2.09
PCNAP12004 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
PCNAP12004 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.02□□□□□ -2.09
PCNAP12004 RNY3P15-201ENST00000516297 97 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNU6-155P-201ENST00000516347 100 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
PCNAP12004 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
PCNAP12004 AL355297.3-201ENST00000604082 446 ntBASIC2.02□□□□□ -2.09
PCNAP12004 U6.115-201ENST00000636045 103 ntBASIC2.02□□□□□ -2.09
PCNAP12004 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCNAP12004 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCNAP12004 Y_RNA.64-201ENST00000362845 102 ntBASIC2.01□□□□□ -2.09
PCNAP12004 Y_RNA.124-201ENST00000363339 93 ntBASIC2.01□□□□□ -2.09
PCNAP12004 RNU6-1240P-201ENST00000365155 104 ntBASIC2.01□□□□□ -2.09
PCNAP12004 RNU6-1310P-201ENST00000384153 107 ntBASIC2.01□□□□□ -2.09
PCNAP12004 Y_RNA.446-201ENST00000384178 104 ntBASIC2.01□□□□□ -2.09
PCNAP12004 SNORA20B-201ENST00000384220 132 ntBASIC2.01□□□□□ -2.09
PCNAP12004 Y_RNA.500-201ENST00000384466 111 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
PCNAP12004 RPL21P1-201ENST00000399532 476 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AL117342.1-201ENST00000404861 406 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AL135786.1-201ENST00000415892 214 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AC096920.1-201ENST00000423991 241 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AC025033.1-201ENST00000463883 194 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AC098869.1-201ENST00000481627 292 ntBASIC2.01□□□□□ -2.09
PCNAP12004 RNU2-12P-201ENST00000517216 168 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.01□□□□□ -2.09
PCNAP12004 SUMO2P18-201ENST00000518873 252 ntBASIC2.01□□□□□ -2.09
PCNAP12004 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.01□□□□□ -2.09
PCNAP12004 AC023157.2-201ENST00000540596 141 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.01□□□□□ -2.09
PCNAP12004 MIR4423-201ENST00000580922 80 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MIR4300-201ENST00000581016 96 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MIR376A1-201ENST00000616574 68 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MIR338-201ENST00000636369 67 ntBASIC2.01□□□□□ -2.09
PCNAP12004 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2□□□□□ -2.09
PCNAP12004 WWP1P1-201ENST00000466609 2769 ntBASIC2□□□□□ -2.09
PCNAP12004 AP006437.1-201ENST00000641440 3685 ntBASIC2□□□□□ -2.09
PCNAP12004 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
PCNAP12004 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.19-201ENST00000362462 99 ntBASIC2□□□□□ -2.09
PCNAP12004 snoU2-30.2-201ENST00000362805 70 ntBASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.145-201ENST00000363527 102 ntBASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.183-201ENST00000363882 113 ntBASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.286-201ENST00000364813 102 ntBASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.459-201ENST00000384251 102 ntBASIC2□□□□□ -2.09
PCNAP12004 RNU6-102P-201ENST00000384485 104 ntBASIC2□□□□□ -2.09
PCNAP12004 MIR23A-201ENST00000385245 73 ntBASIC2□□□□□ -2.09
PCNAP12004 SNORA40.19-201ENST00000390846 128 ntBASIC2□□□□□ -2.09
PCNAP12004 RNA5SP465-201ENST00000391195 109 ntBASIC2□□□□□ -2.09
PCNAP12004 RNA5SP467-201ENST00000391274 118 ntBASIC2□□□□□ -2.09
PCNAP12004 MIR1253-201ENST00000408273 105 ntBASIC2□□□□□ -2.09
PCNAP12004 Y_RNA.602-201ENST00000410535 92 ntBASIC2□□□□□ -2.09
PCNAP12004 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
PCNAP12004 RPL21P38-201ENST00000418090 167 ntBASIC2□□□□□ -2.09
PCNAP12004 Z98742.3-201ENST00000418637 326 ntBASIC2□□□□□ -2.09
PCNAP12004 AC008134.1-201ENST00000420943 193 ntBASIC2□□□□□ -2.09
PCNAP12004 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
PCNAP12004 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCNAP12004 SNORA40.15-201ENST00000516884 107 ntBASIC2□□□□□ -2.09
PCNAP12004 RNU7-110P-201ENST00000516891 62 ntBASIC2□□□□□ -2.09
PCNAP12004 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms