Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MTND1P2-201ENST00000430604 821 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 TOMM22P2-201ENST00000430735 237 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.36□□□□□ -2.19
SFTPBP07988 RPL23AP50-201ENST00000434149 455 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AL135790.2-201ENST00000437701 267 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC027119.1-201ENST00000440877 241 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
SFTPBP07988 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.36□□□□□ -2.19
SFTPBP07988 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.36□□□□□ -2.19
SFTPBP07988 AC004584.2-201ENST00000570407 410 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 SNORD53B-201ENST00000577887 78 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.36□□□□□ -2.19
SFTPBP07988 MIR4438-201ENST00000585271 93 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 AC021506.2-201ENST00000612354 169 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.36□□□□□ -2.19
SFTPBP07988 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SFTPBP07988 Y_RNA.358-201ENST00000365491 99 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 MT-TL1-201ENST00000386347 75 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 ELOCP21-201ENST00000412558 336 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 PDCL2P1-201ENST00000419302 352 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.35□□□□□ -2.19
SFTPBP07988 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.35□□□□□ -2.19
SFTPBP07988 RPS27P22-201ENST00000478056 241 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC010469.2-201ENST00000496412 480 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC022868.1-201ENST00000517767 391 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.35□□□□□ -2.19
SFTPBP07988 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.35□□□□□ -2.19
SFTPBP07988 MIR4255-201ENST00000579351 72 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.35□□□□□ -2.19
SFTPBP07988 MIR1244-1-201ENST00000612829 85 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 MIR8054-201ENST00000620877 86 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC092794.2-201ENST00000620933 563 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.35□□□□□ -2.19
SFTPBP07988 MIR1244-3-201ENST00000635744 85 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 MIR1244-2-201ENST00000636449 85 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 MIR1244-4-202ENST00000636813 85 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 AC006026.1-201ENST00000444025 1803 ntBASIC1.35□□□□□ -2.19
SFTPBP07988 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SFTPBP07988 Y_RNA.269-201ENST00000364685 89 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.34□□□□□ -2.19
SFTPBP07988 MRPS10P1-201ENST00000448483 130 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AC116353.2-201ENST00000505332 712 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 RNU7-99P-201ENST00000516271 62 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AL359821.1-201ENST00000605519 182 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AL365434.2-201ENST00000607979 234 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 uc_338.5-201ENST00000611839 155 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AC099654.5-201ENST00000636479 350 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 AL669831.3-213ENST00000636676 183 ntBASIC1.34□□□□□ -2.19
SFTPBP07988 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SFTPBP07988 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
SFTPBP07988 SNORA25.9-201ENST00000365087 128 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 RNU6-1264P-201ENST00000383891 107 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 RNU6-1145P-201ENST00000384246 107 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 MRPL42P3-201ENST00000401492 326 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 RPL17P19-201ENST00000489069 552 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 RNU6-120P-201ENST00000516077 103 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AC005899.2-201ENST00000584353 90 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AC073413.2-201ENST00000604332 360 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AC040896.1-201ENST00000613819 479 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AC104260.1-201ENST00000616660 539 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
SFTPBP07988 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
SFTPBP07988 RNU6-99P-201ENST00000364721 107 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 SNORA20B-201ENST00000384220 132 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RNU6-950P-201ENST00000384651 107 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RNU6-440P-201ENST00000390882 105 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 AL355796.1-201ENST00000406706 323 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RN7SKP200-201ENST00000410564 320 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RNU6-1304P-201ENST00000411374 106 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.32□□□□□ -2.2
SFTPBP07988 AC009474.2-201ENST00000451383 136 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.32□□□□□ -2.2
SFTPBP07988 AC010598.1-201ENST00000510378 103 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 Y_RNA.691-201ENST00000516611 103 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 AL390123.1-201ENST00000603216 237 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 TPTEP1-208ENST00000636884 213 ntBASIC1.32□□□□□ -2.2
SFTPBP07988 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SFTPBP07988 AC073544.1-201ENST00000600110 1595 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 RNU6-1123P-201ENST00000362347 106 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 SNORD33-201ENST00000362761 85 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 Y_RNA.166-201ENST00000363730 102 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 SNORD81.2-201ENST00000365153 76 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 RNU6-318P-201ENST00000384283 103 ntBASIC1.31□□□□□ -2.2
SFTPBP07988 MIR499A-201ENST00000384903 122 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms