Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-1266P-201ENST00000362794 105 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.184-201ENST00000363884 108 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 MRPL42P3-201ENST00000401492 326 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 USP9YP16-201ENST00000430287 407 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC092473.1-201ENST00000441098 221 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 PGBD4P5-201ENST00000445958 426 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 MRPS10P1-201ENST00000448483 130 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 USP9YP23-201ENST00000455085 407 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC092991.1-201ENST00000477176 376 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC069439.1-201ENST00000494739 167 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC005840.1-201ENST00000498412 377 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.683-201ENST00000516508 93 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.706-201ENST00000516933 99 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 MIR3664-201ENST00000579074 99 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC018638.8-201ENST00000588755 281 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC018462.2-201ENST00000605375 395 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 AC093913.1-201ENST00000614178 329 ntBASIC0.94□□□□□ -2.26
HLA-DPB1P04440 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.94□□□□□ -2.26
HLA-DPB1P04440 RNA5SP361-201ENST00000362686 118 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.490-201ENST00000384413 102 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 RNU6-950P-201ENST00000384651 107 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 AL355796.1-201ENST00000406706 323 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 USMG5P1-201ENST00000425964 177 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 EIF1P2-201ENST00000428233 350 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 TOMM22P2-201ENST00000430735 237 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 U8.22-201ENST00000459141 133 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 RPS27P22-201ENST00000478056 241 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 AC010469.2-201ENST00000496412 480 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 TRMT112P2-201ENST00000512910 132 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.670-201ENST00000516255 105 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 RN7SKP88-201ENST00000516847 250 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 APOOP3-201ENST00000536787 586 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.93□□□□□ -2.26
HLA-DPB1P04440 AC004584.2-201ENST00000570407 410 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 AC100812.1-201ENST00000607622 580 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 7SK.8-201ENST00000612110 250 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 7SK.11-201ENST00000615477 250 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 7SK.13-201ENST00000622040 250 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 AC068647.2-201ENST00000637380 353 ntBASIC0.93□□□□□ -2.26
HLA-DPB1P04440 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
HLA-DPB1P04440 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HLA-DPB1P04440 MIR329-1-201ENST00000385028 80 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 MIR190B-201ENST00000401119 79 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 MIR548K-201ENST00000408406 116 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 MIR548F5-201ENST00000408421 86 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.594-201ENST00000410373 140 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 RN7SKP200-201ENST00000410564 320 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 ELOCP21-201ENST00000412558 336 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AL353997.1-201ENST00000432936 108 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC018710.1-201ENST00000506509 158 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC046134.1-201ENST00000514454 666 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC016727.1-205ENST00000605437 569 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC106754.2-201ENST00000623006 233 ntBASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.92□□□□□ -2.26
HLA-DPB1P04440 AC018630.2-201ENST00000534866 2403 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RNU5F-3P-201ENST00000363767 117 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 SNORA20B-201ENST00000384220 132 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RNU6-505P-201ENST00000384427 107 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 MIR1277-201ENST00000408536 78 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RNU6-321P-201ENST00000410912 106 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AL139396.1-201ENST00000421137 167 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RPS3AP52-201ENST00000435639 297 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 STAG3L5P-204ENST00000443759 179 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 COX6CP14-201ENST00000469580 174 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC010598.1-201ENST00000510378 103 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC097462.1-201ENST00000514125 324 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.655-201ENST00000515919 96 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RNU6-1053P-201ENST00000515930 101 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RNU6-1016P-201ENST00000516689 94 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AP002001.1-203ENST00000534002 267 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 RAB11AP2-201ENST00000545905 639 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 BNIP3P10-201ENST00000605360 577 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC007014.2-201ENST00000615581 479 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 AC002553.4-201ENST00000616896 331 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
HLA-DPB1P04440 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
HLA-DPB1P04440 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
HLA-DPB1P04440 Y_RNA.2-201ENST00000362330 96 ntBASIC0.9□□□□□ -2.27
HLA-DPB1P04440 RNU1-22P-201ENST00000363334 158 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms