Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 RNU6-1264P-201ENST00000383891 107 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 RNA5SP482-201ENST00000391269 118 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 MTCYBP4-201ENST00000401524 249 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 COX6CP14-201ENST00000469580 174 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 OR9P1P-201ENST00000496431 281 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 AC022493.2-201ENST00000506122 481 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 AP002004.2-201ENST00000531656 154 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 MIR4273-201ENST00000582824 84 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 AC100812.1-201ENST00000607622 580 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.95□□□□□ -2.26
IFNB1P01574 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
IFNB1P01574 RNU6-281P-201ENST00000384212 103 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 RNU6-332P-201ENST00000391193 108 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.94□□□□□ -2.26
IFNB1P01574 AL163540.1-201ENST00000485382 386 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 RNU6-917P-201ENST00000516294 104 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 SCARNA16.2-201ENST00000516520 172 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 AC104984.5-201ENST00000586878 94 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 AC022079.1-201ENST00000621546 602 ntBASIC0.94□□□□□ -2.26
IFNB1P01574 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.405-201ENST00000383979 100 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.451-201ENST00000384200 100 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.524-201ENST00000384564 100 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.561-201ENST00000384694 100 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 USP9YP16-201ENST00000430287 407 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 CALM2P4-201ENST00000430810 426 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 MTND3P23-201ENST00000431980 347 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 USP9YP23-201ENST00000455085 407 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.93□□□□□ -2.26
IFNB1P01574 RNU6-107P-201ENST00000516643 102 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.706-201ENST00000516933 99 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AL358944.1-201ENST00000528537 144 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AC109635.3-201ENST00000529536 185 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 CBX3P8-201ENST00000532412 525 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AL121579.1-201ENST00000555129 305 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AC090617.3-201ENST00000573670 475 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 AC091178.2-201ENST00000584401 117 ntBASIC0.93□□□□□ -2.26
IFNB1P01574 Y_RNA.38-201ENST00000362617 102 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
IFNB1P01574 SNORA20B-201ENST00000384220 132 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 Y_RNA.533-201ENST00000384596 114 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 RNU2-64P-201ENST00000411315 191 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 RPL23AP36-201ENST00000413895 458 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.92□□□□□ -2.26
IFNB1P01574 SUMO1P2-201ENST00000452524 304 ntBASIC0.92□□□□□ -2.26
IFNB1P01574 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.91□□□□□ -2.26
IFNB1P01574 PDCD5P2-201ENST00000507570 312 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
IFNB1P01574 SNORA70.12-201ENST00000516084 153 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 RNU6-1278P-201ENST00000516130 107 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 RNU6-864P-201ENST00000516256 108 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 MTND2P38-201ENST00000522536 667 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 AC093023.1-201ENST00000547375 507 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 AC080078.2-201ENST00000603766 501 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
IFNB1P01574 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
IFNB1P01574 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
IFNB1P01574 MIR410-201ENST00000362222 80 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 SNORA27.1-201ENST00000362604 124 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 Y_RNA.124-201ENST00000363339 93 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 Y_RNA.363-201ENST00000365529 113 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 RNU6-1013P-201ENST00000384180 107 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 MIR181A1-201ENST00000385026 110 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 AL355796.1-201ENST00000406706 323 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 Y_RNA.595-201ENST00000410403 105 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 AC009161.1-201ENST00000417306 376 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.9□□□□□ -2.27
IFNB1P01574 AC074133.1-201ENST00000515696 183 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 RNA5SP458-201ENST00000516188 119 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 RNU6-506P-201ENST00000516553 94 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 AC027419.1-201ENST00000522976 328 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
IFNB1P01574 AC024909.2-201ENST00000553035 286 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 snoU13.31-201ENST00000607291 104 ntBASIC0.9□□□□□ -2.27
IFNB1P01574 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
IFNB1P01574 RNU6-306P-201ENST00000384617 107 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 MIR520G-201ENST00000385064 90 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.89□□□□□ -2.27
IFNB1P01574 AC091021.1-201ENST00000468051 388 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.89□□□□□ -2.27
IFNB1P01574 RNA5SP20-201ENST00000515976 84 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 RNU7-12P-201ENST00000516030 62 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 RNU1-54P-201ENST00000517181 120 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 MIR4653-201ENST00000585107 83 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 AC004832.4-201ENST00000608952 331 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
IFNB1P01574 AC024614.3-201ENST00000637860 256 ntBASIC0.89□□□□□ -2.27
IFNB1P01574 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.88□□□□□ -2.27
IFNB1P01574 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
IFNB1P01574 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
IFNB1P01574 SNORD114-7-201ENST00000362520 77 ntBASIC0.88□□□□□ -2.27
IFNB1P01574 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
IFNB1P01574 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
IFNB1P01574 Y_RNA.559-201ENST00000384686 107 ntBASIC0.88□□□□□ -2.27
IFNB1P01574 RNU6-376P-201ENST00000384731 106 ntBASIC0.88□□□□□ -2.27
IFNB1P01574 RNA5SP118-201ENST00000410385 109 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms