Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 Y_RNA.210-201ENST00000364161 110 ntBASIC1.81□□□□□ -2.12
NGFP01138 Y_RNA.361-201ENST00000365515 120 ntBASIC1.81□□□□□ -2.12
NGFP01138 RNU6-1105P-201ENST00000384774 107 ntBASIC1.81□□□□□ -2.12
NGFP01138 HMGN2P39-201ENST00000398005 273 ntBASIC1.81□□□□□ -2.12
NGFP01138 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.81□□□□□ -2.12
NGFP01138 AC139712.2-201ENST00000424302 339 ntBASIC1.81□□□□□ -2.12
NGFP01138 AL353689.1-201ENST00000438895 199 ntBASIC1.81□□□□□ -2.12
NGFP01138 AL731563.1-201ENST00000442202 214 ntBASIC1.81□□□□□ -2.12
NGFP01138 RNU6-107P-201ENST00000516643 102 ntBASIC1.81□□□□□ -2.12
NGFP01138 AC025647.1-201ENST00000517879 253 ntBASIC1.81□□□□□ -2.12
NGFP01138 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.81□□□□□ -2.12
NGFP01138 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.81□□□□□ -2.12
NGFP01138 MIR4300-201ENST00000581016 96 ntBASIC1.81□□□□□ -2.12
NGFP01138 AL031274.2-201ENST00000599419 203 ntBASIC1.81□□□□□ -2.12
NGFP01138 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.81□□□□□ -2.12
NGFP01138 AC004467.1-201ENST00000615678 330 ntBASIC1.81□□□□□ -2.12
NGFP01138 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.81□□□□□ -2.12
NGFP01138 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NGFP01138 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NGFP01138 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NGFP01138 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NGFP01138 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NGFP01138 Y_RNA.101-201ENST00000363154 102 ntBASIC1.8□□□□□ -2.12
NGFP01138 Y_RNA.143-201ENST00000363520 106 ntBASIC1.8□□□□□ -2.12
NGFP01138 SNORA3A-201ENST00000364113 130 ntBASIC1.8□□□□□ -2.12
NGFP01138 Y_RNA.243-201ENST00000364481 109 ntBASIC1.8□□□□□ -2.12
NGFP01138 Y_RNA.459-201ENST00000384251 102 ntBASIC1.8□□□□□ -2.12
NGFP01138 RNU2-54P-201ENST00000410299 190 ntBASIC1.8□□□□□ -2.12
NGFP01138 RNU6-121P-201ENST00000410525 99 ntBASIC1.8□□□□□ -2.12
NGFP01138 RNU6-1199P-201ENST00000411249 104 ntBASIC1.8□□□□□ -2.12
NGFP01138 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.8□□□□□ -2.12
NGFP01138 AC016909.1-201ENST00000415916 166 ntBASIC1.8□□□□□ -2.12
NGFP01138 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.8□□□□□ -2.12
NGFP01138 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.8□□□□□ -2.12
NGFP01138 LINC01399-202ENST00000458450 244 ntBASIC1.8□□□□□ -2.12
NGFP01138 RNU6-397P-201ENST00000516226 104 ntBASIC1.8□□□□□ -2.12
NGFP01138 MIR3169-201ENST00000578032 83 ntBASIC1.8□□□□□ -2.12
NGFP01138 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.8□□□□□ -2.12
NGFP01138 AC130454.1-201ENST00000622948 401 ntBASIC1.8□□□□□ -2.12
NGFP01138 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NGFP01138 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NGFP01138 RNU1-58P-201ENST00000362413 163 ntBASIC1.79□□□□□ -2.12
NGFP01138 SNORD114-7-201ENST00000362520 77 ntBASIC1.79□□□□□ -2.12
NGFP01138 Y_RNA.105-201ENST00000363182 111 ntBASIC1.79□□□□□ -2.12
NGFP01138 RNA5SP493-201ENST00000364115 91 ntBASIC1.79□□□□□ -2.12
NGFP01138 RNU6-937P-201ENST00000384325 106 ntBASIC1.79□□□□□ -2.12
NGFP01138 MIR518A2-201ENST00000384966 87 ntBASIC1.79□□□□□ -2.12
NGFP01138 snosnR66.1-201ENST00000391095 99 ntBASIC1.79□□□□□ -2.12
NGFP01138 RNU6-57P-201ENST00000411348 103 ntBASIC1.79□□□□□ -2.12
NGFP01138 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
NGFP01138 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
NGFP01138 SUMO1P2-201ENST00000452524 304 ntBASIC1.79□□□□□ -2.12
NGFP01138 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
NGFP01138 SNORA40.15-201ENST00000516884 107 ntBASIC1.79□□□□□ -2.12
NGFP01138 SNORA31.25-201ENST00000517242 134 ntBASIC1.79□□□□□ -2.12
NGFP01138 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
NGFP01138 AL353149.1-201ENST00000610667 244 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.15-201ENST00000611544 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.16-201ENST00000613119 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.12-201ENST00000613778 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.20-201ENST00000613956 192 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.9-201ENST00000615427 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.11-201ENST00000616345 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.2-201ENST00000616535 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.3-201ENST00000617785 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.19-201ENST00000618602 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 RNU2-1-201ENST00000618664 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.6-201ENST00000619225 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.5-201ENST00000619465 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 U2.10-201ENST00000620268 191 ntBASIC1.79□□□□□ -2.12
NGFP01138 AC091932.3-201ENST00000624223 323 ntBASIC1.79□□□□□ -2.12
NGFP01138 U6.115-201ENST00000636045 103 ntBASIC1.79□□□□□ -2.12
NGFP01138 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
NGFP01138 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NGFP01138 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NGFP01138 Y_RNA.19-201ENST00000362462 99 ntBASIC1.78□□□□□ -2.12
NGFP01138 RNU6-1175P-201ENST00000365200 107 ntBASIC1.78□□□□□ -2.12
NGFP01138 RNA5SP37-201ENST00000365420 130 ntBASIC1.78□□□□□ -2.12
NGFP01138 Y_RNA.446-201ENST00000384178 104 ntBASIC1.78□□□□□ -2.12
NGFP01138 Y_RNA.574-201ENST00000384766 95 ntBASIC1.78□□□□□ -2.12
NGFP01138 MIR764-201ENST00000390811 85 ntBASIC1.78□□□□□ -2.12
NGFP01138 MIR1283-2-201ENST00000408621 87 ntBASIC1.78□□□□□ -2.12
NGFP01138 AL139156.1-201ENST00000412785 841 ntBASIC1.78□□□□□ -2.12
NGFP01138 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
NGFP01138 MTATP8P1-201ENST00000467115 207 ntBASIC1.78□□□□□ -2.12
NGFP01138 MTCO2P24-201ENST00000515611 426 ntBASIC1.78□□□□□ -2.12
NGFP01138 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
NGFP01138 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
NGFP01138 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.78□□□□□ -2.12
NGFP01138 AC121758.2-201ENST00000553271 193 ntBASIC1.78□□□□□ -2.12
NGFP01138 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.78□□□□□ -2.12
NGFP01138 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
NGFP01138 AL590240.4-201ENST00000616908 390 ntBASIC1.78□□□□□ -2.12
NGFP01138 AC006435.5-201ENST00000624486 112 ntBASIC1.78□□□□□ -2.12
NGFP01138 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
NGFP01138 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.77□□□□□ -2.13
NGFP01138 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
NGFP01138 RNU6-1240P-201ENST00000365155 104 ntBASIC1.77□□□□□ -2.13
NGFP01138 RPL23AP36-201ENST00000413895 458 ntBASIC1.77□□□□□ -2.13
NGFP01138 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms