Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
MBD4O95243 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
MBD4O95243 ELOCP21-201ENST00000412558 336 ntBASIC1.85□□□□□ -2.11
MBD4O95243 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
MBD4O95243 AC022493.2-201ENST00000506122 481 ntBASIC1.85□□□□□ -2.11
MBD4O95243 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.85□□□□□ -2.11
MBD4O95243 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.85□□□□□ -2.11
MBD4O95243 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.85□□□□□ -2.11
MBD4O95243 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
MBD4O95243 MIR4438-201ENST00000585271 93 ntBASIC1.85□□□□□ -2.11
MBD4O95243 AC073544.1-201ENST00000600110 1595 ntBASIC1.85□□□□□ -2.11
MBD4O95243 MIR410-201ENST00000362222 80 ntBASIC1.84□□□□□ -2.11
MBD4O95243 RNU6-60P-201ENST00000364792 103 ntBASIC1.84□□□□□ -2.11
MBD4O95243 Y_RNA.387-201ENST00000383918 102 ntBASIC1.84□□□□□ -2.11
MBD4O95243 RNU6-890P-201ENST00000384121 107 ntBASIC1.84□□□□□ -2.11
MBD4O95243 Y_RNA.498-201ENST00000384460 102 ntBASIC1.84□□□□□ -2.11
MBD4O95243 SNORA69.1-201ENST00000390904 137 ntBASIC1.84□□□□□ -2.11
MBD4O95243 RNU11-5P-201ENST00000391216 129 ntBASIC1.84□□□□□ -2.11
MBD4O95243 MRPS10P1-201ENST00000448483 130 ntBASIC1.84□□□□□ -2.11
MBD4O95243 RNU7-34P-201ENST00000459394 64 ntBASIC1.84□□□□□ -2.11
MBD4O95243 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD4O95243 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD4O95243 AC018448.1-201ENST00000552843 316 ntBASIC1.84□□□□□ -2.11
MBD4O95243 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
MBD4O95243 AL357075.2-201ENST00000614906 189 ntBASIC1.84□□□□□ -2.11
MBD4O95243 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
MBD4O95243 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.12
MBD4O95243 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
MBD4O95243 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
MBD4O95243 MIR126-201ENST00000362291 85 ntBASIC1.83□□□□□ -2.12
MBD4O95243 Y_RNA.67-201ENST00000362870 100 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNU4-13P-201ENST00000364019 141 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNA5SP363-201ENST00000365072 115 ntBASIC1.83□□□□□ -2.12
MBD4O95243 Y_RNA.384-201ENST00000383909 102 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNA5SP109-201ENST00000391010 116 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNU6-1156P-201ENST00000410365 100 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RPL30P15-201ENST00000457129 321 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNU6-625P-201ENST00000459412 107 ntBASIC1.83□□□□□ -2.12
MBD4O95243 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
MBD4O95243 AC144568.1-201ENST00000520139 137 ntBASIC1.83□□□□□ -2.12
MBD4O95243 MIR4801-201ENST00000582704 82 ntBASIC1.83□□□□□ -2.12
MBD4O95243 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.83□□□□□ -2.12
MBD4O95243 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
MBD4O95243 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MBD4O95243 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MBD4O95243 SNORA4.2-201ENST00000365313 147 ntBASIC1.82□□□□□ -2.12
MBD4O95243 RNU6-318P-201ENST00000384283 103 ntBASIC1.82□□□□□ -2.12
MBD4O95243 SNORA67.6-201ENST00000391093 99 ntBASIC1.82□□□□□ -2.12
MBD4O95243 RPL21P1-201ENST00000399532 476 ntBASIC1.82□□□□□ -2.12
MBD4O95243 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
MBD4O95243 MTND4P28-201ENST00000426217 387 ntBASIC1.82□□□□□ -2.12
MBD4O95243 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD4O95243 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD4O95243 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD4O95243 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.82□□□□□ -2.12
MBD4O95243 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
MBD4O95243 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.82□□□□□ -2.12
MBD4O95243 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.82□□□□□ -2.12
MBD4O95243 SNORA40.9-201ENST00000515895 93 ntBASIC1.82□□□□□ -2.12
MBD4O95243 RNU6-470P-201ENST00000515954 104 ntBASIC1.82□□□□□ -2.12
MBD4O95243 RNU7-128P-201ENST00000517247 62 ntBASIC1.82□□□□□ -2.12
MBD4O95243 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.82□□□□□ -2.12
MBD4O95243 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
MBD4O95243 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MBD4O95243 RNU6-1301P-201ENST00000362724 104 ntBASIC1.81□□□□□ -2.12
MBD4O95243 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
MBD4O95243 Y_RNA.259-201ENST00000364619 101 ntBASIC1.81□□□□□ -2.12
MBD4O95243 RNU4-42P-201ENST00000364738 142 ntBASIC1.81□□□□□ -2.12
MBD4O95243 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
MBD4O95243 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
MBD4O95243 Y_RNA.592-201ENST00000410274 109 ntBASIC1.81□□□□□ -2.12
MBD4O95243 SNORD12B-201ENST00000410433 91 ntBASIC1.81□□□□□ -2.12
MBD4O95243 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.81□□□□□ -2.12
MBD4O95243 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.81□□□□□ -2.12
MBD4O95243 RPS27P1-201ENST00000450552 247 ntBASIC1.81□□□□□ -2.12
MBD4O95243 AC010469.2-201ENST00000496412 480 ntBASIC1.81□□□□□ -2.12
MBD4O95243 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MBD4O95243 MIR8063-201ENST00000621930 81 ntBASIC1.81□□□□□ -2.12
MBD4O95243 MIR1302-1-201ENST00000637932 143 ntBASIC1.81□□□□□ -2.12
MBD4O95243 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
MBD4O95243 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MBD4O95243 RNA5SP475-201ENST00000410568 110 ntBASIC1.8□□□□□ -2.12
MBD4O95243 MTCO3P19-201ENST00000415864 321 ntBASIC1.8□□□□□ -2.12
MBD4O95243 BTF3P4-201ENST00000418852 495 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC245047.3-201ENST00000429428 127 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC005002.2-201ENST00000438228 269 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC245517.4-201ENST00000448601 281 ntBASIC1.8□□□□□ -2.12
MBD4O95243 SUMO1P2-201ENST00000452524 304 ntBASIC1.8□□□□□ -2.12
MBD4O95243 MTCO3P10-201ENST00000455912 772 ntBASIC1.8□□□□□ -2.12
MBD4O95243 RNU6-277P-201ENST00000516272 106 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC022217.4-201ENST00000604389 163 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AL132765.2-201ENST00000610812 351 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC087588.2-201ENST00000617667 426 ntBASIC1.8□□□□□ -2.12
MBD4O95243 AC095038.3-201ENST00000634439 195 ntBASIC1.8□□□□□ -2.12
MBD4O95243 MIR3674-201ENST00000636576 68 ntBASIC1.8□□□□□ -2.12
MBD4O95243 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
MBD4O95243 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MBD4O95243 MIR302D-201ENST00000362275 68 ntBASIC1.79□□□□□ -2.12
MBD4O95243 RNU6-271P-201ENST00000363858 105 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms