Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SCAF4O95104 RNU6-151P-201ENST00000364158 107 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 Y_RNA.488-201ENST00000384403 102 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 Y_RNA.497-201ENST00000384447 98 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 MIR490-201ENST00000384865 128 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 MIR34B-201ENST00000385076 84 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 MIR569-201ENST00000385228 96 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 MT-TT-201ENST00000387460 66 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 SNORD17-201ENST00000390930 237 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 U6atac.2-201ENST00000408644 118 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 RNA5SP229-201ENST00000410809 99 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 RPS12P18-201ENST00000442381 270 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 AC245047.8-201ENST00000456455 284 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 RPS26P55-201ENST00000471178 356 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 AC117454.1-201ENST00000491120 168 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 RNU7-115P-201ENST00000516433 55 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.6□□□□□ -1.99
SCAF4O95104 MIR5688-201ENST00000580619 83 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 AC093732.2-201ENST00000607950 274 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 MIR1248-201ENST00000629190 106 ntBASIC2.6□□□□□ -1.99
SCAF4O95104 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SCAF4O95104 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.6□□□□□ -1.99
SCAF4O95104 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SCAF4O95104 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SCAF4O95104 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.59□□□□□ -1.99
SCAF4O95104 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SCAF4O95104 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
SCAF4O95104 Z82209.1-201ENST00000422141 2135 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 Y_RNA.229-201ENST00000364347 113 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SCAF4O95104 MIR218-1-201ENST00000384999 110 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 RNU6-57P-201ENST00000411348 103 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AC016909.1-201ENST00000415916 166 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.59□□□□□ -1.99
SCAF4O95104 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.59□□□□□ -1.99
SCAF4O95104 AC008155.2-201ENST00000464337 397 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 RPS29P2-201ENST00000479278 136 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AC010598.1-201ENST00000510378 103 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 RNA5SP272-201ENST00000516095 111 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 RNU6-426P-201ENST00000516464 97 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 SCARNA3-201ENST00000517097 143 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.59□□□□□ -1.99
SCAF4O95104 AC022616.8-201ENST00000533569 253 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AP003357.1-201ENST00000604497 148 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AL391903.3-201ENST00000612158 163 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 MIR548AY-201ENST00000617669 107 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AC068647.2-201ENST00000637380 353 ntBASIC2.59□□□□□ -1.99
SCAF4O95104 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.59□□□□□ -1.99
SCAF4O95104 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
SCAF4O95104 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.59□□□□□ -2
SCAF4O95104 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SCAF4O95104 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.58□□□□□ -2
SCAF4O95104 Y_RNA.343-201ENST00000365354 112 ntBASIC2.58□□□□□ -2
SCAF4O95104 RNU6-144P-201ENST00000383951 107 ntBASIC2.58□□□□□ -2
SCAF4O95104 RNU6-418P-201ENST00000384035 107 ntBASIC2.58□□□□□ -2
SCAF4O95104 Y_RNA.586-201ENST00000391146 98 ntBASIC2.58□□□□□ -2
SCAF4O95104 RNU6-383P-201ENST00000410864 94 ntBASIC2.58□□□□□ -2
SCAF4O95104 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.58□□□□□ -2
SCAF4O95104 AC114982.1-201ENST00000469402 321 ntBASIC2.58□□□□□ -2
SCAF4O95104 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.58□□□□□ -2
SCAF4O95104 RNU6-561P-201ENST00000516222 102 ntBASIC2.58□□□□□ -2
SCAF4O95104 RNU6-1007P-201ENST00000516586 107 ntBASIC2.58□□□□□ -2
SCAF4O95104 RNU6-965P-201ENST00000516721 96 ntBASIC2.58□□□□□ -2
SCAF4O95104 AC025647.1-201ENST00000517879 253 ntBASIC2.58□□□□□ -2
SCAF4O95104 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.58□□□□□ -2
SCAF4O95104 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCAF4O95104 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.58□□□□□ -2
SCAF4O95104 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCAF4O95104 AL356292.1-201ENST00000283110 373 ntBASIC2.57□□□□□ -2
SCAF4O95104 RNU6-959P-201ENST00000384671 107 ntBASIC2.57□□□□□ -2
SCAF4O95104 SNORD88.1-201ENST00000408684 91 ntBASIC2.57□□□□□ -2
SCAF4O95104 MIR1278-201ENST00000408753 81 ntBASIC2.57□□□□□ -2
SCAF4O95104 SNORA36B-201ENST00000410438 131 ntBASIC2.57□□□□□ -2
SCAF4O95104 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.57□□□□□ -2
SCAF4O95104 HSPE1P21-201ENST00000438283 308 ntBASIC2.57□□□□□ -2
SCAF4O95104 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
SCAF4O95104 RPL36AP21-201ENST00000490372 323 ntBASIC2.57□□□□□ -2
SCAF4O95104 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.57□□□□□ -2
SCAF4O95104 RNU1-104P-201ENST00000517280 175 ntBASIC2.57□□□□□ -2
SCAF4O95104 IGKV2-26-201ENST00000518305 343 ntBASIC2.57□□□□□ -2
SCAF4O95104 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
SCAF4O95104 MIR4724-201ENST00000579485 89 ntBASIC2.57□□□□□ -2
SCAF4O95104 AC105245.1-201ENST00000581934 244 ntBASIC2.57□□□□□ -2
SCAF4O95104 MIR3199-1-201ENST00000582434 88 ntBASIC2.57□□□□□ -2
SCAF4O95104 AC090115.4-201ENST00000609970 188 ntBASIC2.57□□□□□ -2
SCAF4O95104 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
SCAF4O95104 SCARNA15.3-201ENST00000626315 122 ntBASIC2.57□□□□□ -2
SCAF4O95104 SCARNA4.1-201ENST00000628597 123 ntBASIC2.57□□□□□ -2
SCAF4O95104 MIR3658-201ENST00000636291 56 ntBASIC2.57□□□□□ -2
SCAF4O95104 U6.105-201ENST00000637379 88 ntBASIC2.57□□□□□ -2
SCAF4O95104 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCAF4O95104 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCAF4O95104 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.57□□□□□ -2
SCAF4O95104 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
SCAF4O95104 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
SCAF4O95104 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
SCAF4O95104 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms