| UPP2 | O95045 | CEP44-201 | ENST00000296519 | 4173 nt | APPRIS P1 TSL 1 (best) BASIC | 3.92 | □□□□□ -1.78 | | |
| UPP2 | O95045 | MAP3K7-202 | ENST00000369325 | 4633 nt | TSL 1 (best) BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | Y_RNA.344-201 | ENST00000365381 | 112 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | SNORD77.3-201 | ENST00000391113 | 65 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | MIR1255A-201 | ENST00000408338 | 113 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | AC063976.3-201 | ENST00000426849 | 329 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | RPL30P4-201 | ENST00000429309 | 333 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | S100A11P1-201 | ENST00000477525 | 312 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | TLR10-206 | ENST00000508334 | 2616 nt | APPRIS P1 TSL 1 (best) BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | RNU2-27P-201 | ENST00000516185 | 142 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | RNY4P20-201 | ENST00000516678 | 93 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | AP002992.1-202 | ENST00000530842 | 551 nt | TSL 2 BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | MIR4644-201 | ENST00000579929 | 84 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | MIR3609-201 | ENST00000582661 | 80 nt | BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | RTN4-209 | ENST00000405240 | 4061 nt | TSL 1 (best) BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | PCDH15-208 | ENST00000395432 | 6901 nt | TSL 5 BASIC | 3.91 | □□□□□ -1.78 | | |
| UPP2 | O95045 | UBE3AP2-201 | ENST00000429033 | 2259 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | Y_RNA.78-201 | ENST00000362970 | 110 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-486P-201 | ENST00000363116 | 107 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNY4P6-201 | ENST00000363667 | 96 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR300-201 | ENST00000401138 | 83 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC020594.1-201 | ENST00000437680 | 338 nt | TSL 3 BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AL441985.1-201 | ENST00000457727 | 251 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-893P-201 | ENST00000458841 | 100 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | PIK3C2G-203 | ENST00000535651 | 2497 nt | TSL 5 BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | BRCA2-206 | ENST00000544455 | 10984 nt | APPRIS P1 TSL 1 (best) BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | FIGNL1-203 | ENST00000419119 | 3700 nt | APPRIS P1 TSL 1 (best) BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | CNOT2-231 | ENST00000551483 | 4753 nt | TSL 2 BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | LRRN3-203 | ENST00000422987 | 3513 nt | APPRIS P1 TSL 1 (best) BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RAD17-202 | ENST00000305138 | 3164 nt | TSL 1 (best) BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MBNL1-218 | ENST00000485910 | 4257 nt | TSL 1 (best) BASIC | 3.9 | □□□□□ -1.79 | | |
| UPP2 | O95045 | KIAA0586-215 | ENST00000619722 | 5597 nt | APPRIS ALT2 TSL 2 BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | ADGRL2-211 | ENST00000370730 | 6173 nt | TSL 5 BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AL049781.1-201 | ENST00000623195 | 3585 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR302B-201 | ENST00000362188 | 73 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | Y_RNA.17-201 | ENST00000362433 | 111 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU1-22P-201 | ENST00000363334 | 158 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | Y_RNA.221-201 | ENST00000364248 | 96 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNA5SP57-201 | ENST00000459463 | 123 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC131956.1-201 | ENST00000506420 | 258 nt | TSL 2 BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-1231P-201 | ENST00000517185 | 103 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR2052-201 | ENST00000636055 | 55 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC058791.1-201 | ENST00000608412 | 3198 nt | BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 3.89 | □□□□□ -1.79 | | |
| UPP2 | O95045 | IPO8P1-201 | ENST00000455509 | 3109 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | TBC1D31-210 | ENST00000521676 | 3256 nt | TSL 5 BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | SYNE2-202 | ENST00000344113 | 21777 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AP000873.1-201 | ENST00000463987 | 400 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | TRBV12-2-201 | ENST00000489763 | 344 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | Y_RNA.666-201 | ENST00000516187 | 112 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | SCARNA15.3-201 | ENST00000626315 | 122 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | SCARNA4.1-201 | ENST00000628597 | 123 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | CEP170P1-201 | ENST00000502249 | 4587 nt | BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | PKN2-AS1-202 | ENST00000458097 | 3542 nt | TSL 2 BASIC | 3.88 | □□□□□ -1.79 | | |
| UPP2 | O95045 | TBC1D31-206 | ENST00000518805 | 2201 nt | TSL 2 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | PRKD3-202 | ENST00000379066 | 6111 nt | APPRIS P1 TSL 5 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | FOXP2-224 | ENST00000635534 | 4290 nt | TSL 5 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MUC15-203 | ENST00000455601 | 3156 nt | APPRIS P1 TSL 2 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-888P-201 | ENST00000363010 | 101 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | SNORD17-201 | ENST00000390930 | 237 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | EIF4EP4-201 | ENST00000424916 | 578 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AP001486.1-201 | ENST00000463339 | 476 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AL049873.1-201 | ENST00000480540 | 376 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC005921.1-201 | ENST00000510589 | 286 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC084364.2-201 | ENST00000546924 | 395 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC079598.5-201 | ENST00000547460 | 117 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC079466.2-201 | ENST00000585394 | 185 nt | TSL 5 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | uc_338.32-201 | ENST00000615087 | 172 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR8057-201 | ENST00000620957 | 69 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | RGS18-201 | ENST00000367460 | 2150 nt | APPRIS P1 TSL 1 (best) BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | ADGRL2-210 | ENST00000370728 | 6302 nt | APPRIS ALT2 TSL 5 BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC080128.1-201 | ENST00000474389 | 1917 nt | BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | PGGT1B-203 | ENST00000419445 | 9545 nt | APPRIS P1 TSL 1 (best) BASIC | 3.87 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MS4A1-212 | ENST00000534668 | 3475 nt | APPRIS P1 TSL 2 BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | Y_RNA.93-201 | ENST00000363066 | 109 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | TRAJ59-201 | ENST00000390480 | 54 nt | APPRIS P1 BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AL513477.1-202 | ENST00000417061 | 214 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC245052.1-201 | ENST00000426213 | 410 nt | TSL 3 BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC097462.1-201 | ENST00000514125 | 324 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | MIR3186-201 | ENST00000577404 | 85 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC006435.5-201 | ENST00000624486 | 112 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC244205.2-202 | ENST00000635781 | 342 nt | BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | ZNF415-224 | ENST00000601493 | 2132 nt | TSL 1 (best) BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | KIAA1841-211 | ENST00000612149 | 4202 nt | TSL 5 BASIC | 3.86 | □□□□□ -1.79 | | |
| UPP2 | O95045 | ZNF479-202 | ENST00000331162 | 2072 nt | APPRIS P1 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| UPP2 | O95045 | CCDC110-202 | ENST00000393540 | 2722 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.85 | □□□□□ -1.79 | | |
| UPP2 | O95045 | OR6P1-202 | ENST00000641540 | 3255 nt | APPRIS P1 BASIC | 3.85 | □□□□□ -1.79 | | |
| UPP2 | O95045 | U3.44-201 | ENST00000458938 | 192 nt | BASIC | 3.85 | □□□□□ -1.79 | | |
| UPP2 | O95045 | AC022137.1-201 | ENST00000483735 | 151 nt | BASIC | 3.85 | □□□□□ -1.79 | | |