Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 HSPE1P13-201ENST00000451143 297 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RPL39P38-201ENST00000467018 153 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 Y_RNA.706-201ENST00000516933 99 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNU7-128P-201ENST00000517247 62 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AC091144.1-201ENST00000519573 138 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK3AO75631 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK3AO75631 MIR4438-201ENST00000585271 93 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 BX284668.6-201ENST00000606899 438 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
UPK3AO75631 RNU6-53P-201ENST00000365367 106 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UPK3AO75631 USP9YP16-201ENST00000430287 407 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 USP9YP23-201ENST00000455085 407 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK3AO75631 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 RPS27P22-201ENST00000478056 241 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK3AO75631 RNU4-49P-201ENST00000516080 140 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 RNU7-99P-201ENST00000516271 62 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 AC023157.2-201ENST00000540596 141 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 MIR4790-201ENST00000577799 79 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
UPK3AO75631 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK3AO75631 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK3AO75631 RNU6-842P-201ENST00000384269 107 ntBASIC1□□□□□ -2.25
UPK3AO75631 Y_RNA.490-201ENST00000384413 102 ntBASIC1□□□□□ -2.25
UPK3AO75631 MIR222-201ENST00000384992 110 ntBASIC1□□□□□ -2.25
UPK3AO75631 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
UPK3AO75631 AL139396.1-201ENST00000421137 167 ntBASIC1□□□□□ -2.25
UPK3AO75631 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1□□□□□ -2.25
UPK3AO75631 AC092989.1-201ENST00000481235 277 ntBASIC1□□□□□ -2.25
UPK3AO75631 RNU6-1114P-201ENST00000516022 107 ntBASIC1□□□□□ -2.25
UPK3AO75631 Y_RNA.683-201ENST00000516508 93 ntBASIC1□□□□□ -2.25
UPK3AO75631 CYCSP23-201ENST00000519781 313 ntBASIC1□□□□□ -2.25
UPK3AO75631 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
UPK3AO75631 AC093023.1-201ENST00000547375 507 ntBASIC1□□□□□ -2.25
UPK3AO75631 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
UPK3AO75631 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
UPK3AO75631 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
UPK3AO75631 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
UPK3AO75631 AC100812.1-201ENST00000607622 580 ntBASIC1□□□□□ -2.25
UPK3AO75631 U4.5-201ENST00000617137 123 ntBASIC1□□□□□ -2.25
UPK3AO75631 AC068647.2-201ENST00000637380 353 ntBASIC1□□□□□ -2.25
UPK3AO75631 Y_RNA.106-201ENST00000363189 100 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 AC010469.2-201ENST00000496412 480 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 AC004584.2-201ENST00000570407 410 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.99□□□□□ -2.25
UPK3AO75631 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 AC091895.1-201ENST00000624494 256 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 MIR3688-2-201ENST00000636963 87 ntBASIC0.99□□□□□ -2.25
UPK3AO75631 Y_RNA.269-201ENST00000364685 89 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 Y_RNA.301-201ENST00000364990 103 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RNU6-281P-201ENST00000384212 103 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 Y_RNA.473-201ENST00000384333 102 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RNU6-1215P-201ENST00000384441 102 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RNU1-139P-201ENST00000391307 165 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 STAG3L5P-204ENST00000443759 179 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 MRPS10P1-201ENST00000448483 130 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RNU7-94P-201ENST00000459576 63 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 RPS23P4-201ENST00000487908 423 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 Y_RNA.682-201ENST00000516457 100 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK3AO75631 AL162424.1-201ENST00000602325 221 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 AC080078.3-201ENST00000605407 463 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 AC106754.2-201ENST00000623006 233 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK3AO75631 SNORD3E-202ENST00000627253 216 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 AC068137.4-201ENST00000638485 296 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
UPK3AO75631 MTND5P16-201ENST00000460269 1703 ntBASIC0.98□□□□□ -2.25
UPK3AO75631 MIR518E-201ENST00000385252 88 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 SNORA12.1-201ENST00000390873 148 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 RNU6-1001P-201ENST00000411265 100 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK3AO75631 SNORD5.1-201ENST00000458800 75 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AC092991.1-201ENST00000477176 376 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 RPS29P25-201ENST00000481709 171 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 HMGN1P7-201ENST00000491722 313 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AC010598.1-201ENST00000510378 103 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 RNU6-718P-201ENST00000516166 105 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.97□□□□□ -2.25
UPK3AO75631 AC093783.1-201ENST00000612976 329 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AC073349.3-201ENST00000617616 186 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AL513423.1-201ENST00000621695 132 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AC018630.2-201ENST00000534866 2403 ntBASIC0.97□□□□□ -2.25
UPK3AO75631 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 MIR548F1-201ENST00000408667 84 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK3AO75631 UQCRBP2-201ENST00000447827 297 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms