Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.51□□□□□ -1.53
NPM3O75607 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.51□□□□□ -1.53
NPM3O75607 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NPM3O75607 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.5□□□□□ -1.53
NPM3O75607 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NPM3O75607 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NPM3O75607 SNORA25.9-201ENST00000365087 128 ntBASIC5.5□□□□□ -1.53
NPM3O75607 Y_RNA.537-201ENST00000384626 109 ntBASIC5.5□□□□□ -1.53
NPM3O75607 AL133547.1-201ENST00000448546 220 ntBASIC5.5□□□□□ -1.53
NPM3O75607 snoU13.16-201ENST00000459350 104 ntBASIC5.5□□□□□ -1.53
NPM3O75607 Y_RNA.660-201ENST00000516002 120 ntBASIC5.5□□□□□ -1.53
NPM3O75607 SNORA70.19-201ENST00000516717 90 ntBASIC5.5□□□□□ -1.53
NPM3O75607 RNU7-137P-201ENST00000516788 62 ntBASIC5.5□□□□□ -1.53
NPM3O75607 LINC00901.1-201ENST00000617252 152 ntBASIC5.5□□□□□ -1.53
NPM3O75607 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.5□□□□□ -1.53
NPM3O75607 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NPM3O75607 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.49□□□□□ -1.53
NPM3O75607 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
NPM3O75607 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.49□□□□□ -1.53
NPM3O75607 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPM3O75607 RNA5SP509-201ENST00000364577 119 ntBASIC5.49□□□□□ -1.53
NPM3O75607 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NPM3O75607 MIR1262-201ENST00000408276 93 ntBASIC5.49□□□□□ -1.53
NPM3O75607 SCARNA18B-201ENST00000458806 135 ntBASIC5.49□□□□□ -1.53
NPM3O75607 SNORD4B-201ENST00000459083 72 ntBASIC5.49□□□□□ -1.53
NPM3O75607 MIR3169-201ENST00000578032 83 ntBASIC5.49□□□□□ -1.53
NPM3O75607 SNORA62.6-201ENST00000606322 83 ntBASIC5.49□□□□□ -1.53
NPM3O75607 AC105081.1-201ENST00000617727 106 ntBASIC5.49□□□□□ -1.53
NPM3O75607 MIR6830-201ENST00000636015 70 ntBASIC5.49□□□□□ -1.53
NPM3O75607 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPM3O75607 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
NPM3O75607 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPM3O75607 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
NPM3O75607 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPM3O75607 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NPM3O75607 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPM3O75607 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPM3O75607 HMGN1P33-201ENST00000432945 451 ntBASIC5.48□□□□□ -1.53
NPM3O75607 HMGN2P7-201ENST00000456186 273 ntBASIC5.48□□□□□ -1.53
NPM3O75607 MIR548AR-201ENST00000582191 57 ntBASIC5.48□□□□□ -1.53
NPM3O75607 AC069114.2-201ENST00000604699 304 ntBASIC5.48□□□□□ -1.53
NPM3O75607 MIR6716-201ENST00000613413 80 ntBASIC5.48□□□□□ -1.53
NPM3O75607 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPM3O75607 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPM3O75607 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.48□□□□□ -1.53
NPM3O75607 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPM3O75607 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.47□□□□□ -1.53
NPM3O75607 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NPM3O75607 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.47□□□□□ -1.53
NPM3O75607 RNU6-1019P-201ENST00000364424 107 ntBASIC5.47□□□□□ -1.53
NPM3O75607 MIR659-201ENST00000384963 97 ntBASIC5.47□□□□□ -1.53
NPM3O75607 MIR708-201ENST00000390708 88 ntBASIC5.47□□□□□ -1.53
NPM3O75607 RNA5SP464-201ENST00000516251 108 ntBASIC5.47□□□□□ -1.53
NPM3O75607 MIR5195-201ENST00000583555 115 ntBASIC5.47□□□□□ -1.53
NPM3O75607 MIR8066-201ENST00000617280 78 ntBASIC5.47□□□□□ -1.53
NPM3O75607 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPM3O75607 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPM3O75607 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPM3O75607 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPM3O75607 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPM3O75607 RNA5SP133-201ENST00000363368 119 ntBASIC5.46□□□□□ -1.54
NPM3O75607 AC003685.2-201ENST00000422795 395 ntBASIC5.46□□□□□ -1.54
NPM3O75607 CYCSP40-201ENST00000575927 294 ntBASIC5.46□□□□□ -1.54
NPM3O75607 MIR8055-201ENST00000610739 97 ntBASIC5.46□□□□□ -1.54
NPM3O75607 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPM3O75607 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.46□□□□□ -1.54
NPM3O75607 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPM3O75607 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NPM3O75607 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 SNORA63.2-201ENST00000362603 126 ntBASIC5.45□□□□□ -1.54
NPM3O75607 CKS1BP6-201ENST00000424932 240 ntBASIC5.45□□□□□ -1.54
NPM3O75607 U3.44-201ENST00000458938 192 ntBASIC5.45□□□□□ -1.54
NPM3O75607 SNORD123-201ENST00000459473 70 ntBASIC5.45□□□□□ -1.54
NPM3O75607 RN7SL810P-201ENST00000493031 276 ntBASIC5.45□□□□□ -1.54
NPM3O75607 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.45□□□□□ -1.54
NPM3O75607 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.45□□□□□ -1.54
NPM3O75607 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPM3O75607 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NPM3O75607 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
NPM3O75607 MIR1265-201ENST00000408444 86 ntBASIC5.44□□□□□ -1.54
NPM3O75607 RNU6-1015P-201ENST00000517121 99 ntBASIC5.44□□□□□ -1.54
NPM3O75607 AL512598.1-201ENST00000610158 273 ntBASIC5.44□□□□□ -1.54
NPM3O75607 MIR8065-201ENST00000620577 100 ntBASIC5.44□□□□□ -1.54
NPM3O75607 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPM3O75607 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPM3O75607 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NPM3O75607 RN7SKP167-201ENST00000411047 285 ntBASIC5.43□□□□□ -1.54
NPM3O75607 RPS29P17-201ENST00000430795 166 ntBASIC5.43□□□□□ -1.54
NPM3O75607 VWA8P1-201ENST00000510889 176 ntBASIC5.43□□□□□ -1.54
NPM3O75607 RNU6-807P-201ENST00000516805 107 ntBASIC5.43□□□□□ -1.54
NPM3O75607 AC005786.1-201ENST00000588553 154 ntBASIC5.43□□□□□ -1.54
NPM3O75607 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC5.43□□□□□ -1.54
NPM3O75607 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.43□□□□□ -1.54
NPM3O75607 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NPM3O75607 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPM3O75607 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 359.1 ms