Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF40O75150 FAM35CP-201ENST00000554755 2470 ntBASIC4.21□□□□□ -1.73
RNF40O75150 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF40O75150 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF40O75150 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RNF40O75150 AL353689.1-201ENST00000438895 199 ntBASIC4.21□□□□□ -1.74
RNF40O75150 AL133547.1-201ENST00000448546 220 ntBASIC4.21□□□□□ -1.74
RNF40O75150 AC010401.1-201ENST00000463867 348 ntBASIC4.21□□□□□ -1.74
RNF40O75150 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF40O75150 MIR4666B-201ENST00000578142 81 ntBASIC4.21□□□□□ -1.74
RNF40O75150 AC087685.1-201ENST00000587507 141 ntBASIC4.21□□□□□ -1.74
RNF40O75150 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF40O75150 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF40O75150 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF40O75150 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF40O75150 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF40O75150 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF40O75150 RNU1-96P-201ENST00000364163 162 ntBASIC4.2□□□□□ -1.74
RNF40O75150 SNORA2.2-201ENST00000365473 135 ntBASIC4.2□□□□□ -1.74
RNF40O75150 RNU6-644P-201ENST00000391155 98 ntBASIC4.2□□□□□ -1.74
RNF40O75150 AP001486.1-201ENST00000463339 476 ntBASIC4.2□□□□□ -1.74
RNF40O75150 RPL30P14-201ENST00000482744 348 ntBASIC4.2□□□□□ -1.74
RNF40O75150 RNU1-61P-201ENST00000516107 151 ntBASIC4.2□□□□□ -1.74
RNF40O75150 MIR5588-201ENST00000581890 63 ntBASIC4.2□□□□□ -1.74
RNF40O75150 AC008739.3-201ENST00000603262 127 ntBASIC4.2□□□□□ -1.74
RNF40O75150 AC012531.4-201ENST00000616509 177 ntBASIC4.2□□□□□ -1.74
RNF40O75150 AC012442.3-202ENST00000636742 206 ntBASIC4.2□□□□□ -1.74
RNF40O75150 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF40O75150 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF40O75150 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF40O75150 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
RNF40O75150 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 MIR208A-201ENST00000362287 71 ntBASIC4.19□□□□□ -1.74
RNF40O75150 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RNF40O75150 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF40O75150 RNU7-128P-201ENST00000517247 62 ntBASIC4.19□□□□□ -1.74
RNF40O75150 AC073413.2-201ENST00000604332 360 ntBASIC4.19□□□□□ -1.74
RNF40O75150 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 AF117829.1-206ENST00000621883 3802 ntBASIC4.19□□□□□ -1.74
RNF40O75150 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF40O75150 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
RNF40O75150 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF40O75150 Z82217.1-201ENST00000625157 8149 ntBASIC4.18□□□□□ -1.74
RNF40O75150 RNU1-72P-201ENST00000362976 153 ntBASIC4.18□□□□□ -1.74
RNF40O75150 RNA5SP387-201ENST00000364226 106 ntBASIC4.18□□□□□ -1.74
RNF40O75150 Y_RNA.242-201ENST00000364473 110 ntBASIC4.18□□□□□ -1.74
RNF40O75150 RNU1-133P-201ENST00000364867 167 ntBASIC4.18□□□□□ -1.74
RNF40O75150 U8.17-201ENST00000391292 132 ntBASIC4.18□□□□□ -1.74
RNF40O75150 MIR548O-201ENST00000408583 114 ntBASIC4.18□□□□□ -1.74
RNF40O75150 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.18□□□□□ -1.74
RNF40O75150 AC006011.1-201ENST00000442758 349 ntBASIC4.18□□□□□ -1.74
RNF40O75150 RNU7-171P-201ENST00000459581 62 ntBASIC4.18□□□□□ -1.74
RNF40O75150 AC113410.1-201ENST00000505029 247 ntBASIC4.18□□□□□ -1.74
RNF40O75150 RNU2-35P-201ENST00000516446 142 ntBASIC4.18□□□□□ -1.74
RNF40O75150 MIR4694-201ENST00000578534 80 ntBASIC4.18□□□□□ -1.74
RNF40O75150 U2.20-201ENST00000613956 192 ntBASIC4.18□□□□□ -1.74
RNF40O75150 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RNF40O75150 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RNF40O75150 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF40O75150 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF40O75150 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF40O75150 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF40O75150 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF40O75150 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF40O75150 RNA5SP124-201ENST00000362739 110 ntBASIC4.17□□□□□ -1.74
RNF40O75150 RNU6-170P-201ENST00000362832 104 ntBASIC4.17□□□□□ -1.74
RNF40O75150 SNORD46.1-201ENST00000364139 104 ntBASIC4.17□□□□□ -1.74
RNF40O75150 RNU6-1189P-201ENST00000383958 107 ntBASIC4.17□□□□□ -1.74
RNF40O75150 SNORA11.1-201ENST00000408133 129 ntBASIC4.17□□□□□ -1.74
RNF40O75150 Y_RNA.621-201ENST00000411065 96 ntBASIC4.17□□□□□ -1.74
RNF40O75150 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF40O75150 AC139453.2-201ENST00000487255 133 ntBASIC4.17□□□□□ -1.74
RNF40O75150 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF40O75150 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF40O75150 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF40O75150 MIR3683-201ENST00000580847 82 ntBASIC4.17□□□□□ -1.74
RNF40O75150 MIR3944-201ENST00000581277 108 ntBASIC4.17□□□□□ -1.74
RNF40O75150 MIR4305-201ENST00000583252 102 ntBASIC4.17□□□□□ -1.74
RNF40O75150 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF40O75150 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF40O75150 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF40O75150 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RNF40O75150 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF40O75150 ZNF271P-202ENST00000465539 1970 ntBASIC4.16□□□□□ -1.74
RNF40O75150 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RNF40O75150 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF40O75150 Y_RNA.10-201ENST00000362371 110 ntBASIC4.16□□□□□ -1.74
RNF40O75150 RNA5SP167-201ENST00000365461 116 ntBASIC4.16□□□□□ -1.74
RNF40O75150 MIR449B-201ENST00000384995 97 ntBASIC4.16□□□□□ -1.74
RNF40O75150 MIR577-201ENST00000385196 96 ntBASIC4.16□□□□□ -1.74
RNF40O75150 RPL21P3-201ENST00000395517 478 ntBASIC4.16□□□□□ -1.74
RNF40O75150 Z98742.2-201ENST00000431564 187 ntBASIC4.16□□□□□ -1.74
RNF40O75150 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF40O75150 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF40O75150 AC019288.1-201ENST00000557918 224 ntBASIC4.16□□□□□ -1.74
RNF40O75150 AC103810.1-201ENST00000579873 453 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms