Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSH5O43196 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
MSH5O43196 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSH5O43196 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
MSH5O43196 AC023934.1-201ENST00000574529 2389 ntBASIC6.42□□□□□ -1.38
MSH5O43196 RNY1P13-201ENST00000365030 105 ntBASIC6.42□□□□□ -1.38
MSH5O43196 RNY4P3-201ENST00000365254 95 ntBASIC6.42□□□□□ -1.38
MSH5O43196 MIR516A2-201ENST00000384888 90 ntBASIC6.42□□□□□ -1.38
MSH5O43196 MIR516A1-201ENST00000385033 90 ntBASIC6.42□□□□□ -1.38
MSH5O43196 RNU6-1254P-201ENST00000391266 104 ntBASIC6.42□□□□□ -1.38
MSH5O43196 FTLP19-201ENST00000433300 394 ntBASIC6.42□□□□□ -1.38
MSH5O43196 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC6.42□□□□□ -1.38
MSH5O43196 RN7SKP46-201ENST00000515942 234 ntBASIC6.42□□□□□ -1.38
MSH5O43196 U6.81-201ENST00000612550 106 ntBASIC6.42□□□□□ -1.38
MSH5O43196 AC243994.1-201ENST00000618627 109 ntBASIC6.42□□□□□ -1.38
MSH5O43196 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
MSH5O43196 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MSH5O43196 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
MSH5O43196 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC6.41□□□□□ -1.38
MSH5O43196 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSH5O43196 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MSH5O43196 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MSH5O43196 RNA5SP146-201ENST00000410743 123 ntBASIC6.41□□□□□ -1.38
MSH5O43196 AC123900.1-201ENST00000420390 96 ntBASIC6.41□□□□□ -1.38
MSH5O43196 Z98742.2-201ENST00000431564 187 ntBASIC6.41□□□□□ -1.38
MSH5O43196 TRBV12-1-201ENST00000479785 344 ntBASIC6.41□□□□□ -1.38
MSH5O43196 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.41□□□□□ -1.38
MSH5O43196 IGKV2OR2-2-201ENST00000605025 300 ntBASIC6.41□□□□□ -1.38
MSH5O43196 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
MSH5O43196 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
MSH5O43196 RNA5SP223-201ENST00000365174 120 ntBASIC6.4□□□□□ -1.38
MSH5O43196 RNU6-1237P-201ENST00000384777 107 ntBASIC6.4□□□□□ -1.38
MSH5O43196 MIR589-201ENST00000385238 99 ntBASIC6.4□□□□□ -1.38
MSH5O43196 AL357552.1-201ENST00000445254 415 ntBASIC6.4□□□□□ -1.38
MSH5O43196 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.4□□□□□ -1.38
MSH5O43196 RNA5SP249-201ENST00000516127 99 ntBASIC6.4□□□□□ -1.38
MSH5O43196 MIR92B-201ENST00000607575 96 ntBASIC6.4□□□□□ -1.38
MSH5O43196 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
MSH5O43196 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
MSH5O43196 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
MSH5O43196 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MSH5O43196 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.39□□□□□ -1.39
MSH5O43196 RNA5SP447-201ENST00000363749 119 ntBASIC6.39□□□□□ -1.39
MSH5O43196 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
MSH5O43196 RPL23AP6-201ENST00000446637 472 ntBASIC6.39□□□□□ -1.39
MSH5O43196 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.39□□□□□ -1.39
MSH5O43196 AL356218.2-201ENST00000605264 187 ntBASIC6.39□□□□□ -1.39
MSH5O43196 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
MSH5O43196 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.39□□□□□ -1.39
MSH5O43196 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
MSH5O43196 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
MSH5O43196 ATP5A1P2-201ENST00000412323 255 ntBASIC6.38□□□□□ -1.39
MSH5O43196 BX323845.1-201ENST00000432417 179 ntBASIC6.38□□□□□ -1.39
MSH5O43196 MTND4LP1-201ENST00000446263 157 ntBASIC6.38□□□□□ -1.39
MSH5O43196 MIR3140-201ENST00000583685 90 ntBASIC6.38□□□□□ -1.39
MSH5O43196 MIR4765-201ENST00000585007 77 ntBASIC6.38□□□□□ -1.39
MSH5O43196 AC005000.2-201ENST00000605468 310 ntBASIC6.38□□□□□ -1.39
MSH5O43196 CR392039.5-201ENST00000623201 510 ntBASIC6.38□□□□□ -1.39
MSH5O43196 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MSH5O43196 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
MSH5O43196 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH5O43196 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH5O43196 PWAR6-201ENST00000552334 4618 ntBASIC6.37□□□□□ -1.39
MSH5O43196 RNU6-957P-201ENST00000363652 99 ntBASIC6.37□□□□□ -1.39
MSH5O43196 Y_RNA.354-201ENST00000365448 111 ntBASIC6.37□□□□□ -1.39
MSH5O43196 SNORA57.1-201ENST00000391227 145 ntBASIC6.37□□□□□ -1.39
MSH5O43196 AL732292.1-201ENST00000426692 226 ntBASIC6.37□□□□□ -1.39
MSH5O43196 RN7SL604P-201ENST00000492589 296 ntBASIC6.37□□□□□ -1.39
MSH5O43196 AL163195.1-201ENST00000496941 348 ntBASIC6.37□□□□□ -1.39
MSH5O43196 ENPP7P9-201ENST00000514456 627 ntBASIC6.37□□□□□ -1.39
MSH5O43196 MRPL49P2-201ENST00000521066 465 ntBASIC6.37□□□□□ -1.39
MSH5O43196 MIR3160-1-201ENST00000577972 85 ntBASIC6.37□□□□□ -1.39
MSH5O43196 SNORD14A-201ENST00000606526 91 ntBASIC6.37□□□□□ -1.39
MSH5O43196 uc_338.14-201ENST00000613162 166 ntBASIC6.37□□□□□ -1.39
MSH5O43196 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.37□□□□□ -1.39
MSH5O43196 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.37□□□□□ -1.39
MSH5O43196 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MSH5O43196 AC112198.2-201ENST00000426589 6996 ntBASIC6.37□□□□□ -1.39
MSH5O43196 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MSH5O43196 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.36□□□□□ -1.39
MSH5O43196 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 RNU6-824P-201ENST00000363724 104 ntBASIC6.36□□□□□ -1.39
MSH5O43196 MIR548F3-201ENST00000408509 87 ntBASIC6.36□□□□□ -1.39
MSH5O43196 CKS1BP6-201ENST00000424932 240 ntBASIC6.36□□□□□ -1.39
MSH5O43196 TRIAP1P1-201ENST00000427062 225 ntBASIC6.36□□□□□ -1.39
MSH5O43196 RNU7-28P-201ENST00000516759 62 ntBASIC6.36□□□□□ -1.39
MSH5O43196 CYCSP40-201ENST00000575927 294 ntBASIC6.36□□□□□ -1.39
MSH5O43196 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
MSH5O43196 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.36□□□□□ -1.39
MSH5O43196 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MSH5O43196 CEP170P1-201ENST00000502249 4587 ntBASIC6.36□□□□□ -1.39
MSH5O43196 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MSH5O43196 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MSH5O43196 SNORA70.10-201ENST00000384515 134 ntBASIC6.35□□□□□ -1.39
MSH5O43196 MIR5089-201ENST00000580047 84 ntBASIC6.35□□□□□ -1.39
MSH5O43196 RN7SL690P-201ENST00000582087 240 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms