Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC018448.1-201ENST00000552843 316 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 MIR4299-201ENST00000577899 72 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 AL353149.1-201ENST00000610667 244 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 AC006157.1-201ENST00000611750 366 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 AC083806.3-201ENST00000614016 455 ntBASIC1.98□□□□□ -2.09
ATP2A1O14983 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 Y_RNA.27-201ENST00000362540 103 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 RNU6-474P-201ENST00000384243 107 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 SNORD78.2-201ENST00000391076 69 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ATP2A1O14983 MCFD2P1-201ENST00000417812 300 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 AC008134.1-201ENST00000420943 193 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 PMCHL1-202ENST00000423102 261 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 FCF1P4-201ENST00000448326 183 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 ATP5J2P3-201ENST00000451550 258 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.97□□□□□ -2.09
ATP2A1O14983 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 RN7SKP295-201ENST00000517264 153 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 SUMO2P18-201ENST00000518873 252 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 CBX3P4-201ENST00000538909 354 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 SNORD58B-201ENST00000607313 66 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.97□□□□□ -2.09
ATP2A1O14983 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 MIR410-201ENST00000362222 80 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 Y_RNA.138-201ENST00000363462 102 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 RNU6-308P-201ENST00000390957 107 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 HMGN2P19-201ENST00000425149 265 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 AL160004.2-201ENST00000432935 350 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.96□□□□□ -2.1
ATP2A1O14983 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
ATP2A1O14983 RNU6-625P-201ENST00000459412 107 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.96□□□□□ -2.1
ATP2A1O14983 MIR4419B-201ENST00000577260 68 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.96□□□□□ -2.1
ATP2A1O14983 MIR5188-201ENST00000583467 113 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 AC007485.1-201ENST00000616755 206 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 U1.36-201ENST00000620684 176 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
ATP2A1O14983 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATP2A1O14983 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ATP2A1O14983 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATP2A1O14983 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ATP2A1O14983 Y_RNA.31-201ENST00000362574 102 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 RNU4-76P-201ENST00000364509 141 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 MRPL35P1-201ENST00000404272 572 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 MIR548P-201ENST00000408336 84 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 AL354751.2-201ENST00000415471 210 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 AC060773.1-201ENST00000421698 310 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 MTND4P19-201ENST00000446659 478 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.95□□□□□ -2.1
ATP2A1O14983 AC011406.1-201ENST00000512440 370 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 RNU6-1012P-201ENST00000516606 109 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 AC025647.1-201ENST00000517879 253 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
ATP2A1O14983 Y_RNA.28-201ENST00000362554 111 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 Y_RNA.526-201ENST00000384572 110 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ATP2A1O14983 SNORA48.1-201ENST00000390879 135 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 MIR1302-11-201ENST00000408051 138 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 MIR1302-9-201ENST00000408365 138 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 MIR1302-10-201ENST00000408734 138 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 SDAD1P3-201ENST00000427380 333 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AC112492.4-201ENST00000456549 352 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AC093852.1-201ENST00000503587 266 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 RNU6-1146P-201ENST00000516282 102 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 Y_RNA.701-201ENST00000516812 110 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.94□□□□□ -2.1
ATP2A1O14983 HSBP1P1-201ENST00000555205 166 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 MIR1302-2-201ENST00000607096 138 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 AC006001.4-201ENST00000622243 395 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 U6.92-201ENST00000636464 89 ntBASIC1.94□□□□□ -2.1
ATP2A1O14983 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ATP2A1O14983 AC005592.1-201ENST00000566527 1640 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 MIR378A-201ENST00000362177 66 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 Y_RNA.148-201ENST00000363557 117 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU6-1240P-201ENST00000365155 104 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU6-708P-201ENST00000384217 107 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNA5SP501-201ENST00000410990 112 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 AC016909.1-201ENST00000415916 166 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 AP1B1P2-201ENST00000416196 106 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RAB28P5-201ENST00000427490 651 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.93□□□□□ -2.1
ATP2A1O14983 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RPL26P26-201ENST00000480251 434 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.93□□□□□ -2.1
ATP2A1O14983 SNORA25.10-201ENST00000515926 124 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 Y_RNA.711-201ENST00000516993 102 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 AC024614.2-201ENST00000577584 372 ntBASIC1.93□□□□□ -2.1
ATP2A1O14983 RNU6-1266P-201ENST00000362794 105 ntBASIC1.92□□□□□ -2.1
ATP2A1O14983 Y_RNA.80-201ENST00000362996 102 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms