Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC004792.1-201ENST00000614523 137 ntBASIC2.38□□□□□ -2.03
TCRBV5S1A1TA0A578 AC073349.3-201ENST00000617616 186 ntBASIC2.38□□□□□ -2.03
TCRBV5S1A1TA0A578 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
TCRBV5S1A1TA0A578 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
TCRBV5S1A1TA0A578 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR411-201ENST00000362239 96 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-525P-201ENST00000363685 104 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-461P-201ENST00000364195 107 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR561-201ENST00000385216 97 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-220P-201ENST00000390919 107 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AL357139.1-201ENST00000407792 426 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 Y_RNA.793-201ENST00000411222 111 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 PIGPP3-201ENST00000425307 415 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AC104332.2-201ENST00000429959 156 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 PRELID3BP1-201ENST00000457142 540 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AC016925.1-201ENST00000458303 298 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 SNORD2.1-201ENST00000458762 69 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 Y_RNA.644-201ENST00000459006 113 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 SNORA70.12-201ENST00000516084 153 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 Y_RNA.674-201ENST00000516362 113 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 AC009127.3-201ENST00000570531 403 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR3117-201ENST00000584034 78 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 snoZ196.1-201ENST00000625269 89 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 snoU18.1-201ENST00000629629 71 ntBASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TCRBV5S1A1TA0A578 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-209P-201ENST00000384118 107 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR548I3-201ENST00000408378 149 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR548I1-201ENST00000408810 149 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-221P-201ENST00000459541 99 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNA5SP24-201ENST00000516478 95 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 Z83818.1-201ENST00000603584 150 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 AC009831.4-201ENST00000620744 325 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU1-23P-201ENST00000363361 144 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 Y_RNA.361-201ENST00000365515 120 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-211P-201ENST00000384047 107 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 SNORD14D-201ENST00000384390 87 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC003685.2-201ENST00000422795 395 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC016717.1-201ENST00000448918 286 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 RN7SKP40-201ENST00000517211 242 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC136628.3-201ENST00000521868 290 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AP005660.1-201ENST00000522972 293 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC024405.2-202ENST00000532731 184 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 CBX3P4-201ENST00000538909 354 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 AC011921.3-201ENST00000605540 361 ntBASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.35□□□□□ -2.03
TCRBV5S1A1TA0A578 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 SNORD114-7-201ENST00000362520 77 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-1272P-201ENST00000362776 107 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-743P-201ENST00000364151 106 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU6-57P-201ENST00000411348 103 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 BTF3P11-201ENST00000426582 477 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 RNU2-34P-201ENST00000516534 121 ntBASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.34□□□□□ -2.03
TCRBV5S1A1TA0A578 FAM35CP-201ENST00000554755 2470 ntBASIC2.34□□□□□ -2.04
TCRBV5S1A1TA0A578 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.34□□□□□ -2.04
TCRBV5S1A1TA0A578 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 RNU6-1235P-201ENST00000384559 107 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 MIR627-201ENST00000384979 97 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 SNORA40.19-201ENST00000390846 128 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AL137159.1-201ENST00000452808 512 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 RNU6-498P-201ENST00000459468 107 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AC093259.1-201ENST00000509755 300 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AC010598.1-201ENST00000510378 103 ntBASIC2.33□□□□□ -2.04
TCRBV5S1A1TA0A578 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms