Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.15-201ENST00000611544 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.16-201ENST00000613119 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.12-201ENST00000613778 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.20-201ENST00000613956 192 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.9-201ENST00000615427 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.11-201ENST00000616345 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.2-201ENST00000616535 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.3-201ENST00000617785 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.19-201ENST00000618602 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 RNU2-1-201ENST00000618664 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.6-201ENST00000619225 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.5-201ENST00000619465 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 U2.10-201ENST00000620268 191 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AC006435.5-201ENST00000624486 112 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 AL159152.1-201ENST00000635019 2587 ntBASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TCRBV7S3A2A0A539 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-1266P-201ENST00000362794 105 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.136-201ENST00000363444 102 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.396-201ENST00000383949 103 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.461-201ENST00000384263 103 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 AC060773.1-201ENST00000421698 310 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 MIR3169-201ENST00000578032 83 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 MIR3149-201ENST00000584629 83 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 SNORD14A-201ENST00000606526 91 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 AL353149.1-201ENST00000610667 244 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 AP001282.2-201ENST00000616149 309 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 AC006001.4-201ENST00000622243 395 ntBASIC2.14□□□□□ -2.07
TCRBV7S3A2A0A539 MIR335-201ENST00000362173 94 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 RNU1-58P-201ENST00000362413 163 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.193-201ENST00000363979 102 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 RNA5SP493-201ENST00000364115 91 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.483-201ENST00000384380 101 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 HMGN2P39-201ENST00000398005 273 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 AL355796.1-201ENST00000406706 323 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-570P-201ENST00000517051 105 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 RPL12P50-201ENST00000603116 116 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 AC010615.1-201ENST00000594254 1764 ntBASIC2.13□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-326P-201ENST00000365480 107 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.383-201ENST00000383855 97 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA20B-201ENST00000384220 132 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-574P-201ENST00000384265 107 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AL031003.1-201ENST00000404229 172 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AL139156.1-201ENST00000412785 841 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 RPL23AP3-201ENST00000453844 468 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AC011406.1-201ENST00000512440 370 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-1338P-201ENST00000516328 91 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 MIR4446-201ENST00000578505 67 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 MIR6132-201ENST00000622083 109 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 IGHVIII-44-202ENST00000636235 289 ntBASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.12□□□□□ -2.07
TCRBV7S3A2A0A539 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA27.1-201ENST00000362604 124 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.288-201ENST00000364854 92 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-702P-201ENST00000364982 107 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.510-201ENST00000384511 114 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.569-201ENST00000384749 103 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 MIR873-201ENST00000401120 77 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNU2-61P-201ENST00000411069 191 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 POLR2KP2-201ENST00000438155 177 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 MTND4LP30-201ENST00000454092 297 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-1146P-201ENST00000516282 102 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.11□□□□□ -2.07
TCRBV7S3A2A0A539 RNU6-271P-201ENST00000363858 105 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.329-201ENST00000365209 107 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 Y_RNA.418-201ENST00000384029 102 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AL117342.1-201ENST00000404861 406 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AL121890.1-201ENST00000435457 205 ntBASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
TCRBV7S3A2A0A539 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms