Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 Y_RNA.587-201ENST00000391210 103 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AL512604.1-201ENST00000404812 257 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 RNU6-1064P-201ENST00000410626 104 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AC245047.4-201ENST00000433189 144 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 RN7SL542P-201ENST00000467147 294 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 RNA5SP20-201ENST00000515976 84 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 RNA5SP76-201ENST00000516277 87 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AC027419.1-201ENST00000522976 328 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 MIR6798-201ENST00000612887 67 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
CAPN6Q9Y6Q1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-674P-201ENST00000363831 107 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-234P-201ENST00000365229 104 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.584-201ENST00000391090 114 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 RN7SKP202-201ENST00000410439 330 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 CYCSP49-201ENST00000420810 319 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC010154.1-201ENST00000425857 269 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 RPS29P6-201ENST00000438196 145 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC083906.5-201ENST00000503722 328 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 YWHAEP4-201ENST00000505390 198 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-486P-201ENST00000363116 107 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-1080P-201ENST00000383982 107 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.525-201ENST00000384570 113 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 RNA5SP354-201ENST00000391247 136 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 AC016717.1-201ENST00000448918 286 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-197P-201ENST00000516680 100 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-63P-201ENST00000516690 95 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.757-201ENST00000578934 114 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 UBL5P2-201ENST00000583788 219 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.2□□□□□ -1.9
CAPN6Q9Y6Q1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNU4-13P-201ENST00000364019 141 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-944P-201ENST00000364023 107 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 SNORD31B-201ENST00000364977 69 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-1274P-201ENST00000384557 107 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-476P-201ENST00000384726 107 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RNA5SP344-201ENST00000411081 104 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RN7SL863P-201ENST00000462370 296 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 ATP5EP1-201ENST00000510257 156 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.712-201ENST00000517011 92 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AL021707.8-201ENST00000609428 183 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AC006435.5-201ENST00000624486 112 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 AL161912.2-201ENST00000565707 3007 ntBASIC3.19□□□□□ -1.9
CAPN6Q9Y6Q1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 SNORA25.7-201ENST00000364375 127 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 RNU2-55P-201ENST00000411146 174 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AC080013.2-201ENST00000460866 323 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AC006130.2-201ENST00000586202 326 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CAPN6Q9Y6Q1 Y_RNA.294-201ENST00000364916 102 ntBASIC3.17□□□□□ -1.9
CAPN6Q9Y6Q1 RNU6-429P-201ENST00000384582 108 ntBASIC3.17□□□□□ -1.9
CAPN6Q9Y6Q1 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
CAPN6Q9Y6Q1 MIR554-201ENST00000384874 96 ntBASIC3.17□□□□□ -1.9
CAPN6Q9Y6Q1 MIR591-201ENST00000385290 95 ntBASIC3.17□□□□□ -1.9
CAPN6Q9Y6Q1 AC008134.1-201ENST00000420943 193 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms