Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORD87-201ENST00000364849 89 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR586-201ENST00000385035 97 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR1287-201ENST00000408492 90 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.683-201ENST00000516508 93 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 RN7SKP49-201ENST00000516675 260 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 RNA5SP137-201ENST00000516833 135 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR2355-201ENST00000517199 87 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 VN1R91P-201ENST00000594377 169 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 AL031274.2-201ENST00000599419 203 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 AL356055.1-201ENST00000602528 446 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 SNRPGP19-201ENST00000603826 189 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CSNK1G3Q9Y6M4 AC091812.1-201ENST00000432235 1948 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-438P-201ENST00000365561 103 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORD14D-201ENST00000384390 87 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 RNY3P4-201ENST00000384428 101 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR628-201ENST00000385229 95 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.645-201ENST00000391229 102 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR300-201ENST00000401138 83 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC005534.2-201ENST00000431047 433 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 MTCO1P44-201ENST00000441935 243 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC007395.1-201ENST00000451333 677 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC112492.4-201ENST00000456549 352 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC010531.2-201ENST00000465012 153 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 MRPS17P9-201ENST00000511924 393 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC087441.2-201ENST00000529141 262 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC026271.5-201ENST00000577873 130 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC083806.3-201ENST00000614016 455 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
CSNK1G3Q9Y6M4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORD115-3-201ENST00000363100 82 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORD114-6-201ENST00000364393 72 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU6-418P-201ENST00000384035 107 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR1302-11-201ENST00000408051 138 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR1302-9-201ENST00000408365 138 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR1302-10-201ENST00000408734 138 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 RNU2-20P-201ENST00000410425 191 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 SNORD12B-201ENST00000410433 91 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 RNA5SP489-201ENST00000410986 109 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 AC139712.2-201ENST00000424302 339 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 AC003989.2-201ENST00000440224 169 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 AC245517.4-201ENST00000448601 281 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 AC016717.1-201ENST00000448918 286 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 AC010469.2-201ENST00000496412 480 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR4287-201ENST00000579398 78 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 MIR1302-2-201ENST00000607096 138 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.78□□□□□ -2.12
CSNK1G3Q9Y6M4 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.13
CSNK1G3Q9Y6M4 AC005592.1-201ENST00000566527 1640 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 ELOCP21-201ENST00000412558 336 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AC108729.3-201ENST00000513484 108 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 SNORA40.9-201ENST00000515895 93 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 SNORA25.10-201ENST00000515926 124 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 SNORA40.14-201ENST00000516543 86 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AC091144.1-201ENST00000519573 138 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 AL078596.1-201ENST00000624856 447 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 U6.92-201ENST00000636464 89 ntBASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.77□□□□□ -2.13
CSNK1G3Q9Y6M4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.76□□□□□ -2.13
CSNK1G3Q9Y6M4 RNU6-926P-201ENST00000384075 107 ntBASIC1.76□□□□□ -2.13
CSNK1G3Q9Y6M4 RNU6-975P-201ENST00000384296 105 ntBASIC1.76□□□□□ -2.13
CSNK1G3Q9Y6M4 MIR548B-201ENST00000385247 97 ntBASIC1.76□□□□□ -2.13
CSNK1G3Q9Y6M4 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
CSNK1G3Q9Y6M4 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms