Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 RPS26P45-201ENST00000471748 340 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 HMGN1P7-201ENST00000491722 313 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 SNORD33.1-201ENST00000516213 88 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.714-201ENST00000517065 90 ntBASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHGA11Q9Y5H2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.52-201ENST00000362760 96 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR891A-201ENST00000401237 79 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AC060773.1-201ENST00000421698 310 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 RPS29P31-201ENST00000446147 164 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AC233266.1-201ENST00000454518 96 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 RPL21P10-201ENST00000463521 490 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AL355297.2-201ENST00000604792 129 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AC242852.1-201ENST00000612151 96 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR6875-201ENST00000617506 72 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AC244015.1-201ENST00000622301 99 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 U6.98-201ENST00000637157 84 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AC091152.2-201ENST00000591628 2569 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 AL021368.2-201ENST00000606125 5352 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 CEP170P1-201ENST00000502249 4587 ntBASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGA11Q9Y5H2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC018630.2-201ENST00000534866 2403 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU1-23P-201ENST00000363361 144 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AL031121.1-201ENST00000406553 254 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.630-201ENST00000411370 108 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC244505.4-201ENST00000434905 287 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AF228730.3-201ENST00000436691 102 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC018634.1-201ENST00000437554 401 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC006028.1-201ENST00000438379 402 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 SSXP5-201ENST00000443473 287 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC106707.2-201ENST00000484182 374 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AC011406.1-201ENST00000512440 370 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 RN7SKP19-201ENST00000516016 252 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 RNU2-60P-201ENST00000517290 128 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AL022345.2-201ENST00000606307 135 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AL359075.3-201ENST00000613288 217 ntBASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGA11Q9Y5H2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 snoU2-30.2-201ENST00000362805 70 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 Y_RNA.66-201ENST00000362862 102 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 RNA5SP267-201ENST00000364893 126 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 AC063976.4-201ENST00000421971 163 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 SNRPGP10-201ENST00000432323 225 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 SCARNA14-201ENST00000516903 136 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 AC004832.5-201ENST00000608677 401 ntBASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGA11Q9Y5H2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PCDHGA11Q9Y5H2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA11Q9Y5H2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHGA11Q9Y5H2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-283P-201ENST00000364788 107 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 RNU6-1292P-201ENST00000383856 107 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR30B-201ENST00000384850 88 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 AC004975.1-201ENST00000428733 208 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 RPS29P12-201ENST00000460178 152 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 AC007751.1-201ENST00000529260 376 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR3613-201ENST00000579844 87 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 MIR5187-201ENST00000583479 76 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHGA11Q9Y5H2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHGA11Q9Y5H2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms